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Name : fliP (Mext_0627) Accession : YP_001638112.1 Strain : Methylobacterium extorquens PA1 Genome accession: NC_010172 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : 3.1.1.3 Position : 687770 - 688552 bp Length : 783 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagellum DNA sequence : GTGAAGAGAGTGCGCGCGATCCTCGTTACCGCTGGTCTTGCCCTGGCGGCCGGCCTGACCGCCTCCGCCGCTCTGGCGCA GGGTGCTGCACCCGGCGGCGTCACCGGCGTGCCCGGCCTCGACGCGCTGCTTCCGCCCGGCAACGGGGCGGCCTCCGGGC GCATCATCCAGCTCGTCGCGCTGCTCACGGTGCTGTCGCTGGCGCCGGGCCTGCTCGTGATGGTGACGAGCTTCACGCGT TTTGCCGTCGCGTTCTCGTTCCTGCGCTCGGGGCTGGGCCTACAGAGCACGCCGGCCAACCTGTTCCTCGTCTCGCTCGC CCTGTTCATGACCTTCTACGTCATGGCGCCGACCTTCGACCGCGCCTGGAACGAGGGCGTGAAGCCGCTGCAGGAGAACC GCATCAGCGAAGAGGAAGCCTTCGGCAAGATCGTCGATCCGTTCCGCGAGTTCATGACCCAGCACGTGCGACCGAAGGAC CTTCAGACCTTCACGGACCTGGCGAGCCGCACCTTCCCCAAGGCCGAGGCCGGCGAGAAGATCGACCTGCGCATCCTGAT CCCTGCCTTCATGATCTCCGAGCTGCGCCGGGGCTTCGAGATCGGCTTCCTGATCGTGCTGCCCTTCCTCGTCATCGACA TCATCGTCTCCACCATCGTGATGTCGATGGGCATGATGATGCTGCCGCCGACGGTGATCTCGCTGCCGTTCAAGGTGCTG TTCTTCATCCTGATCGACGGTTGGAACTTGCTGGTGAGCGGCTTGGTGCGGTCGTTCTTCTGA Protein sequence : MKRVRAILVTAGLALAAGLTASAALAQGAAPGGVTGVPGLDALLPPGNGAASGRIIQLVALLTVLSLAPGLLVMVTSFTR FAVAFSFLRSGLGLQSTPANLFLVSLALFMTFYVMAPTFDRAWNEGVKPLQENRISEEEAFGKIVDPFREFMTQHVRPKD LQTFTDLASRTFPKAEAGEKIDLRILIPAFMISELRRGFEIGFLIVLPFLVIDIIVSTIVMSMGMMMLPPTVISLPFKVL FFILIDGWNLLVSGLVRSFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 1e-33 | 44 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 8e-34 | 42 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 8e-34 | 42 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 4e-33 | 42 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 4e-33 | 42 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 6e-34 | 42 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 1e-29 | 41 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 1e-29 | 41 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 1e-29 | 41 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 4e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001638112.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 9e-35 | 47 |
| fliP | YP_001638112.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 4e-47 | 47 |
| fliP | YP_001638112.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 3e-45 | 44 |
| fliP | YP_001638112.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 5e-46 | 44 |
| fliP | YP_001638112.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 4e-34 | 42 |
| fliP | YP_001638112.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 1e-32 | 42 |
| fliP | YP_001638112.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 6e-44 | 42 |
