Gene Information

Name : Mext_4848 (Mext_4848)
Accession : YP_001642287.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 5416572 - 5417501 bp
Length : 930 bp
Strand : -
Note : KEGG: rru:Rru_A3568 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence : 
ATGAGCCTTTCGCGCGCCTTGAGAATCGGAACCCGCGGCAGCCCGATGGCGCTGGCCCAGACCGGCATGGTCCGCGATCG
GATCGTGGCGGCCAATCCGGGATTGGAGACGGAGATCGTCGTCGTCTCGACCGTGGCCGACCGCGTGCTTGATCGGCCCC
TCTCCGAGATCGGCGGCAAGGGCCTGTTCACCAAGGAACTCGAACAGGCCCTGTTTGCCGACGAGATTGATGTTGCCGTC
CACTCGATGAAGGACGTGGAGACGTGGCTGCCCGACGGGCTCGCCATCGCCTGCATCCTCGAACGCGATGATCCGCGCGA
CGCCTTCCTCAGCGCGAATGGGGCCAACGGCTTGGCCGACCTGCCCCCCGGTGCACGGGTCGGCACCTCCTCGCTCAGGC
GGGGCGCGCAGGTGCTGATGCACCGGCCCGATCTCACCATCGTGCCCCTGCGCGGCAATGCCAACACCCGGATGCGCAAG
CTGGAGGCGGGGGAGTGCGACGCCACGCTGCTGGCGCTCGCCGGCCTGCAGCGCCTCGGGATGGCCGATGTCGCCCGCAG
TGTGCTGTCGGTGGAGGAAATGCTCCCGGCCGTGGCGCAGGGCGCACTCGGCATCGAGTGCCGAGCCGGCGACGACGCGA
TCCGGGCGCTGCTGGCGCCGGTCGCCTGCGCCACCACGACGACGGCGCTCGACGCGGAACGCGGGCTGCTCGCCGAACTC
GACGGTTCGTGCCGCACCCCCATCGCGGCGCTTGCGCAGGTGAAGGGGGACCGCATCAGCCTCGACGGGTTGCTGTTCCT
GCCGGATGGCAGCCGCCACTGGGCGGTCCATCGCGAGGGACTGGCCGCGGATGCCGACACAATCGGCCGCGATGCAGGGG
CCGAGCTGAAGCGGGCGGCGGGCGACGTCTACTTCGCCCACCTCAAGTAG

Protein sequence : 
MSLSRALRIGTRGSPMALAQTGMVRDRIVAANPGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFADEIDVAV
HSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRK
LEAGECDATLLALAGLQRLGMADVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAEL
DGSCRTPIAALAQVKGDRISLDGLLFLPDGSRHWAVHREGLAADADTIGRDAGAELKRAAGDVYFAHLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-54 50
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-54 50