Gene Information

Name : Mext_4501 (Mext_4501)
Accession : YP_001641940.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 5020725 - 5022800 bp
Length : 2076 bp
Strand : +
Note : TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: gbe:GbCGDNIH1_0856 transketolase

DNA sequence :
ATGAGCGGTGCAGACACGAGCCCGAAGGCGGCCCTGAGCCAGGGCGACAAGCTCGCGATCGACACGATCCGGACGCTCGC
GATCGACGCGGTGCAGAAGGCCAATTCCGGACATGCCGGCGCGCCGATGGCGCTGGCGCCCGTCGCCTACACCCTGTGGA
ACCGGTATCTGCGCTACGATCCGGCCCATCCGCACTGGCCGAACCGCGACCGCTTCGTGCTCTCGGCCGGTCACGCCTCG
ATGCTGCTCTACGGGCTGCTGCACTTGGCCCGCGTGGCCGAGAAGGACGGCGGCAATTCCCCCGCCATCTCGCTGGACGA
CATCAAGAAATTCCGGCAGCTCGACAGCCGCACGCCGGGCCATCCGGAATACCACTTCACCACCGGCGTCGAGACCACCA
CCGGGCCGCTGGGCCAGGGCGTGGCGAACTCCGTCGGCATGGCGATGGGCGGCCGCTTCAAGGGCGAGCGCCTGAACCGG
CCCGACCTGCCGCTGTTCGACTACAACGTCTACGCCATCTGCTCGGACGGCGACCTGATGGAGGGCGTCAGCCAGGAGGC
CGCGTCGATCGCCGGGCACCTGCGCCTGTCGAACTTGTGCTGGATCTACGACAACAACACCATCACCATCGAGGGCCACA
CCGAACTCGCCTTCTCGGAAGAGGTCGCCGCCCGCTTCCTCGCCTATGGCTGGCAGGTGCTGCGGGTGGCCGATGCCAAC
GACACCCACGCCATCGCCTCGGCGCTCGAGACCTTCCTGCAATCGAGCGACCGCCCGACGCTGATCATCGTCAACTCGAT
CATCGGCTACGGCGCGCCGACCAAGCAGAACACGTCGAAGGCTCATTCCGACGCGCTCGGCCCCGACGAGGTGAAAGGCG
CCAAGCGCGCCTATGGCTGGCCGGAGGATTCCGAGTTCCTGGTGCCGGACGGCGTCTACGACACCTTCGCCGACGGCATC
GGCAAGCGCGGCGCCGCGCTCTACAGTCAGTGGCAGGGCTTCTTCGAGGCCGCCAAGGCGGCGGATGCGGAGCATGCCGA
GGAACTGTCGGCCTTCCTCGAAGGCCGTCTGCCGGAGGGCTGGGACCGCGACATCCCGGTCTTCGAGGCCGACGCCAAGG
GGCTCGCGACGCGCGAATCCTCGGGCAAGGTGCTCAACGCCATCGCCCAGCACGTGCCGTTCCTGCTCGGCGGCTCGGCC
GATCTGGCGCCGTCCAACAAGTCGAACCTCACCTTCGAGGGCGCGGGCTCGCTGACCCCGTTCGAGCCGGGCGGGCGCAA
CATCCATTTCGGCGTGCGCGAGCATGCCATGGGCTCGATCGTGAACGGGCTCGGGCTCGTGGGCCTGCGCGCCTACGGCG
CGACCTTCCTCGTCTTCGCCGACTACATGCGGCCGCCGATCCGGCTCGCCTCGCTGATGGAGCTGCCGGTCTTCCATATC
TTCACCCACGACTCGATCGGCGTGGGCGAGGACGGGCCGACCCACCAGCCGGTGGAGCAGATCCTCTCACTGCGCTGCAT
CCCCGGTCTCCTGACCCTGCGCCCGGCCGACGCCAACGAGGTGGCCGAGGCCTACCGGGTGATCTTCTCCCTAAAAAATC
AGCCGGCGGTGCTGGCCCTGTCGCGCCAGCCGCTCCCGACCTTCGACCGTTCGAAATACGCCCCCGCCTCCGGCACCGCG
AAGGGTGCCTACGTGCTCGCCGATAGCGAGGGCACGCCGGACGTGATCCTGATCGGCACGGGCTCCGAGGTGCAGCTCTG
CGTCGGCGCCTACGAGACCCTGAAGGGCGAGGGCGTGAAGGCGCGCGTCGTCTCGATGCCGTCTTGGGAGCTGTTCGAGC
GCCAGGACGAGGCCTACCGCAACAGCGTCCTGCCGCCGGAGGTTCTGGCGCGCGTGGCCGTGGAGCAGGGCAGCGTGATC
GGCTGGGACCGCTACGCCGGCTCCTCGGGCTCGATCGTCGGCATGCATACCTTCGGCGCCTCGGCTCCGATCAAGGATCT
GCTCGGCAAGTTCGGCTTCACCGCCGAGAAGGTGATCGAAGCGGCCCGCGCGCAGGCGGCCAAGCACAAGAAGTAG

Protein sequence :
MSGADTSPKAALSQGDKLAIDTIRTLAIDAVQKANSGHAGAPMALAPVAYTLWNRYLRYDPAHPHWPNRDRFVLSAGHAS
MLLYGLLHLARVAEKDGGNSPAISLDDIKKFRQLDSRTPGHPEYHFTTGVETTTGPLGQGVANSVGMAMGGRFKGERLNR
PDLPLFDYNVYAICSDGDLMEGVSQEAASIAGHLRLSNLCWIYDNNTITIEGHTELAFSEEVAARFLAYGWQVLRVADAN
DTHAIASALETFLQSSDRPTLIIVNSIIGYGAPTKQNTSKAHSDALGPDEVKGAKRAYGWPEDSEFLVPDGVYDTFADGI
GKRGAALYSQWQGFFEAAKAADAEHAEELSAFLEGRLPEGWDRDIPVFEADAKGLATRESSGKVLNAIAQHVPFLLGGSA
DLAPSNKSNLTFEGAGSLTPFEPGGRNIHFGVREHAMGSIVNGLGLVGLRAYGATFLVFADYMRPPIRLASLMELPVFHI
FTHDSIGVGEDGPTHQPVEQILSLRCIPGLLTLRPADANEVAEAYRVIFSLKNQPAVLALSRQPLPTFDRSKYAPASGTA
KGAYVLADSEGTPDVILIGTGSEVQLCVGAYETLKGEGVKARVVSMPSWELFERQDEAYRNSVLPPEVLARVAVEQGSVI
GWDRYAGSSGSIVGMHTFGASAPIKDLLGKFGFTAEKVIEAARAQAAKHKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 4e-134 46
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 4e-131 45