Gene Information

Name : Mext_4114 (Mext_4114)
Accession : YP_001641555.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4575518 - 4576183 bp
Length : 666 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mlo:mlr6617 two-component system, regulatory protein

DNA sequence : 
ATGCGCATCCTCGTCGTAGAAGACGAGCCGCGCATCGCGGCCGATATCAGCGAGGGTCTGGAGCGGGCCGGCTACGTCGC
CGAGATCGTCGGCGACGGCGAGGCGGCGTGGTTCCGGGCCGAGACCGAGACCTACGACGCCATGGTGCTCGACCTCGGCC
TGCCCCGCCTCGACGGGCTGGGCGTGCTGCGCCGCCTGCGCGGGGCCGACGTCGCCCTGCCGGTGCTGATCCTCACCGCC
CGCGACGGCTGGCGCGAGCGGGTCGAGGGGATCGACGCGGGCGCCGACGACTATCTCGTCAAGCCGTTCCGGATGGAGGA
GCTGGTGGCGCGGCTGCGCGCCATCCTGCGCCGCACCGCCGGCCACGCCTCCCCCGTCCTGCGGGCCGGCGCGGTCGAAC
TCGACACCCGCACCCGCGCAGTCTCGGTAGCGGGCCGCGAGACCGACCTCACCGCGCTCGAATACCGCCTGCTCGCCTTC
CTGCTCCACCGCCAAGGGCAGGTCGTGGCGGCGGGTGAGCTGCTCGACCACCTCCACGGCAGCGACAGCGACCGCGAGGC
CAACGCGCTGGAGGCCCTGCTGACCCGGTTGCGGCGCAAGCTCGGCCCCGGCATCATCGAGACCCGCCGCGGCCACGGCT
ACCTCGTGCCGTCCGATCCGCCGTGA

Protein sequence : 
MRILVVEDEPRIAADISEGLERAGYVAEIVGDGEAAWFRAETETYDAMVLDLGLPRLDGLGVLRRLRGADVALPVLILTA
RDGWRERVEGIDAGADDYLVKPFRMEELVARLRAILRRTAGHASPVLRAGAVELDTRTRAVSVAGRETDLTALEYRLLAF
LLHRQGQVVAAGELLDHLHGSDSDREANALEALLTRLRRKLGPGIIETRRGHGYLVPSDPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mext_4114 YP_001641555.1 response regulator receiver NC_002516.2.879194.p Protein 1e-33 45
Mext_4114 YP_001641555.1 response regulator receiver BAC0197 Protein 3e-26 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mext_4114 YP_001641555.1 response regulator receiver VFG1390 Protein 2e-23 43
Mext_4114 YP_001641555.1 response regulator receiver VFG0473 Protein 4e-24 41