Gene Information

Name : rph (Mext_0401)
Accession : YP_001637894.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 444860 - 445573 bp
Length : 714 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGGCCCTCGAAGCGCGCGGCGGACGCGATGCGCGACGTTACGCTGGAGCGGGCGGTCGCCCGCTACGCGGAAGGCTC
CTGCCTCGTCACCTTCGGCAACACCCGCGTGCTCTGCACCGCCTCGCTGGAAGAGCGTGGCCCGCCGTGGCTGCGCGGCT
CCGGCAAGGGCTGGGTCACCGCCGAATACGCGATGCTGCCCCGCGCCACCCACGAGCGCACCCGCCGCGAGGTCAATTCC
GGCAAGCCGTCGGGCCGCACGCAGGAGATTCAGCGGCTGATCGGCCGCTCCCTGCGCGCCGTCACCAACCTGCCGGCCCT
GGGCGAGCGCCAGATCACCGTCGATTGCGACGTGATCCAGGCCGATGGCGGCACCCGCACCGCCTCGATCACGGGGGCCT
GGGTGGCCCTGCACGATTGCTTCGCCTGGATGCGGGCCCGCTCGATCATCTCGGTCGATCCCCTGAAGGACCATGTCGCG
GCGGTCTCCTGCGGCATCTACAAGGGCCAGCCGGTGCTCGACCTCGACTACGCTGAGGATTCTGCGGCCGAGACGGACGC
AAACTTCGTCGTCACCGGCAAGGGCGGCATCGTCGAGGTGCAGGGCACCGCCGAGATGGAACCGTTCACCGACGAACAGT
TCCTCGAATTGCTGCGGCTCGCCAAGGGCGGCGTGGCGGGGCTCGTCGAGCTGCAGCGGAAGGCCATCGCGTGA

Protein sequence :
MRPSKRAADAMRDVTLERAVARYAEGSCLVTFGNTRVLCTASLEERGPPWLRGSGKGWVTAEYAMLPRATHERTRREVNS
GKPSGRTQEIQRLIGRSLRAVTNLPALGERQITVDCDVIQADGGTRTASITGAWVALHDCFAWMRARSIISVDPLKDHVA
AVSCGIYKGQPVLDLDYAEDSAAETDANFVVTGKGGIVEVQGTAEMEPFTDEQFLELLRLAKGGVAGLVELQRKAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-52 53