Gene Information

Name : Mext_3993 (Mext_3993)
Accession : YP_001641435.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 4434395 - 4435177 bp
Length : 783 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO0399 putative ABC transporter, ATP-binding protein

DNA sequence :
GTGGTGCAAGACCGTATCCTTTCGCTCGGACATGTCCGGGTGGTTGCCAAGCTGCTCGCCAACTTCCCTGCCAAGATCGG
TCGGTGCCTGATGTCGAACAAGGCCGTCTCCCTGTCGCAGATCGAGCTGAGCCTCGGCCGCGGCCCCGCGCGGGTGCATG
TCCTGCGCGGCATCTCGCTCGATGTCGAGCGCGGCGAGGCGGTCGGACTCGTCGGCCCGTCGGGTTCGGGAAAATCGACC
CTGCTCACCGTCATGGCCGGGCTGGAGCGGCCCGATACCGGCCGCGTCACCATCGCCGGCACGGATCTCGGCGGGCTCGA
TGAGGACGGGCTCGCGCGCTTCCGCGGCCGCAACATCGGCATCGTGTTCCAGGCCTTCCACCTCGTGCCGACCATGACGG
CGCTGGAGAACGTGGCGCTGCCGCTCGAACTCGCCAACGCATCCGATCCGCACGGACGGGCGGCGGCGGAACTGGAGGCG
GTGGGGCTCGGCCACCGGCTGCGGCACTACCCAGCGCAGCTCTCCGGCGGCGAACAGCAGCGGGTGGCGATCGCCCGTGC
GCTCGCGCCCGATCCGGCGATCCTGGTCGCCGACGAGCCGACGGGAAACCTCGACGAGGCGACGGGACGGCAGATCGTGG
ACCTATTGTTCGGGCTCAAGCGCGACCGCGGCGCGACCCTGGTCCTGGTGACGCACGATCCCGGCCTCGCCCGGCTGTGC
GACCGCACCGTGCGCCTGCGCGCCGGCCGGATCGAAGCGCCGGCCGAGGCGCAAGAAGTCTGA

Protein sequence :
MVQDRILSLGHVRVVAKLLANFPAKIGRCLMSNKAVSLSQIELSLGRGPARVHVLRGISLDVERGEAVGLVGPSGSGKST
LLTVMAGLERPDTGRVTIAGTDLGGLDEDGLARFRGRNIGIVFQAFHLVPTMTALENVALPLELANASDPHGRAAAELEA
VGLGHRLRHYPAQLSGGEQQRVAIARALAPDPAILVADEPTGNLDEATGRQIVDLLFGLKRDRGATLVLVTHDPGLARLC
DRTVRLRAGRIEAPAEAQEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-21 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-27 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mext_3993 YP_001641435.1 ABC transporter-like protein NC_008702.1.4606598. Protein 9e-35 48
Mext_3993 YP_001641435.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-37 45
Mext_3993 YP_001641435.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-38 44
Mext_3993 YP_001641435.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-34 43
Mext_3993 YP_001641435.1 ABC transporter-like protein NC_012469.1.7685735. Protein 7e-38 42