Gene Information

Name : Mext_3506 (Mext_3506)
Accession : YP_001640962.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 3883849 - 3884457 bp
Length : 609 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mlo:mll6606 response regulator FixJ

DNA sequence : 
ATGGCCCCTGCCCTCGTGCATGTCATCGACGACGACCCCGCCATGCGTGACTCGGTCGCCTTCCTTCTCGACACGGCCGG
CTTCGACGTGCGGCTCTACGAGGCGGGAACGGCCCTGTTGGCGCGGCTCACGCGGCCGCTCCGGGGGTGCATCCTGACCG
ATATCCGCATGCCCGACCTCGACGGGTTGGCCCTGTTCCGCTCCCTCCGCTCGGCCGGTCACACGCTTCCCATCGTGATG
ATGACGGGGCATGGCGACGTGCCGCTCGCGGTGGAGGCGATGAAGCTCGGGGCCTGCGACTTCATCGAGAAGCCGTTCGA
TGGCGAGGCGCTCCTCCGGGCGCTGCAGGCCGCCCTGGAGCAGGGTGGGCCTAACGGCTCGGTCGACCCGATCCTGCAGG
ACTTCATGCGGCGGTTGGCGACCCTGAGCGAGCGCGAGCGCCAGGTTCTCGATCATCTGGTGACCGGGGGCACCAGCAAG
GAGATCGGGCGAAGGCTTCGGATCAGCCCGCGGACCGTCGAGATCTACCGGGCCAAGGTCATGGCCAAGACGCGGGCGGG
AAGCCTGCAGGAACTGGTGCGCTGGGCCGTGCTCGCCGGCTTCGTGTGA

Protein sequence : 
MAPALVHVIDDDPAMRDSVAFLLDTAGFDVRLYEAGTALLARLTRPLRGCILTDIRMPDLDGLALFRSLRSAGHTLPIVM
MTGHGDVPLAVEAMKLGACDFIEKPFDGEALLRALQAALEQGGPNGSVDPILQDFMRRLATLSERERQVLDHLVTGGTSK
EIGRRLRISPRTVEIYRAKVMAKTRAGSLQELVRWAVLAGFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 7e-22 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 7e-22 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 7e-22 41
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 5e-22 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 7e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mext_3506 YP_001640962.1 response regulator receiver VFG0488 Protein 2e-22 41