Gene Information

Name : Mext_3423 (Mext_3423)
Accession : YP_001640880.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3797926 - 3799449 bp
Length : 1524 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase_; KEGG: mlo:mll6639 aldehyde dehydrogenase

DNA sequence :
ATGAACAAGCCCGAATTCCTGGCGGATGCCAAGACGAAGTCGCCGTTTTCGGCGCGCTACGACAACTTCATCGGCGGCCA
GTGGGTCGCGCCGGCGAGCGGCCGCTACTTCGAGAACACCTCCCCCATCACCGGCAAGGTGATCTGCGAGGTCGCCCGCT
CAGAGGCGGCGGACATCGAGCGGGCGCTCGACGCCGCGCACGCCGCCAAGGATGCCTGGGGCCGCACCGCACCGGCCGAG
CGCGCCCGCATCCTCAACAAGATCGCCGACCGGATGGAGGACAACCTCGATCTGATCGCGCTGGCCGAGACCTGGGACAA
CGGCAAGCCGATCCGCGAGACCACCGCCGCCGACATCCCGCTCGCCATCGACCACTGGCGCTACTTCGCCAGCTGCGTCC
GCGCCCAGGAAGGCGCGATCTCCGAGATCGACCACGACACGGTGGCCTATCACTTCCACGAGCCGCTCGGCGTCGTCGGC
CAGATCATCCCGTGGAACTTCCCGATCCTGATGGCGGTGTGGAAGCTGGCGCCTGCGATCGCCGCCGGCAACTGCGTGGT
GCTCAAGCCCGCCGAGCAGACCCCCGCCTCGATCCTCGTGGTGATGGAGCTGATCGGCGACCTGCTGCCGCCGGGCGTCA
TCAACGTCGTCAACGGCTTCGGCCTGGAGGCCGGCAAGCCGCTCGCCTCGAACCCGCGCATCGCCAAGATCGCCTTCACC
GGTGAGACGACCACCGGCCGCCTCATCATGCAGTACGCCTCGCAGAACCTGATCCCGGTGACGCTGGAGCTGGGCGGCAA
GTCGCCGAACATCTTCTTCGGGGATGTCGTCAACGAGGATGACGACTTCTTCGACAAGGCGCTCGAAGGCTTCACCATGT
TCGCCCTCAACCAGGGCGAAGTCTGCACCTGCCCGAGCCGCGCGCTCGTGCACGAGTCGATCTACGACCGCTTCATCGAG
CGCGCGATCAAGCGCGTCGAGGCGATCACCCAGGGCTCGCCGCTCGATCCGGCGACGATGATCGGCGCGCAGGCCTCCTC
GGAGCAGCTCGAGAAGATTCTCAGCTACGTCGATATCGGCCGCCAGGAAGGCGCCGAGTGCCTCACGGGCGGCGCCCGCG
GCACCCGCGAGGGCGATCTGGCCGACGGCTTCTACATGCAGCCGACGGTGTTCAAGGGCCACAACAAGATGCGGATCTTC
CAGGAGGAGATCTTCGGGCCCGTCCTCTCGGTCACGACCTTCAAGGACGACGAGGAGGCGCTCTCCATCGCCAACGACAC
GCTCTACGGCCTCGGCGCCGGCGTGTGGACCCGCGACGGAACCCGCGCCTACCGCTTCGGCCGCGCCATCCAGGCCGGCC
GCGTCTGGACGAACTGCTACCACGCCTATCCGGCGCACGCGGCCTTCGGCGGCTACAAGCAGTCCGGCATCGGCCGTGAG
ACCCACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACATGCTGGTCAGCTACTCCTCGAAGAAGCTCGGGTTCTT
CTAA

Protein sequence :
MNKPEFLADAKTKSPFSARYDNFIGGQWVAPASGRYFENTSPITGKVICEVARSEAADIERALDAAHAAKDAWGRTAPAE
RARILNKIADRMEDNLDLIALAETWDNGKPIRETTAADIPLAIDHWRYFASCVRAQEGAISEIDHDTVAYHFHEPLGVVG
QIIPWNFPILMAVWKLAPAIAAGNCVVLKPAEQTPASILVVMELIGDLLPPGVINVVNGFGLEAGKPLASNPRIAKIAFT
GETTTGRLIMQYASQNLIPVTLELGGKSPNIFFGDVVNEDDDFFDKALEGFTMFALNQGEVCTCPSRALVHESIYDRFIE
RAIKRVEAITQGSPLDPATMIGAQASSEQLEKILSYVDIGRQEGAECLTGGARGTREGDLADGFYMQPTVFKGHNKMRIF
QEEIFGPVLSVTTFKDDEEALSIANDTLYGLGAGVWTRDGTRAYRFGRAIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRE
THKMMLDHYQQTKNMLVSYSSKKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-148 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-153 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-153 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-153 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-153 63
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mext_3423 YP_001640880.1 aldehyde dehydrogenase VFG0082 Protein 3e-148 64