|
Name : Mext_0340 (Mext_0340) Accession : YP_001637835.1 Strain : Methylobacterium extorquens PA1 Genome accession: NC_010172 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 384469 - 385212 bp Length : 744 bp Strand : - Note : KEGG: rpe:RPE_3769 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase DNA sequence : ATGTCCGATCCCCTGATCCTGATTCCGGCCCGCCTCGCCGCGACCCGGCTGCCGTCGAAGCCGCTCGCCGACATCGCGGG CGTGCCAATGATCGTGCATGTCTGGCGCCGTGCCGTGGAGGCGGGAATCGGTCCCGTCGTGGTCGCCACCGACACCGACG CGGTCGCCGAGGTGATCGAGGCGCAGGGCGGGCTGGCGGTGATGACCCGGCCCGACCACCCCTCCGGCTCCGACCGTCTC GCGGAAGCGCTGGAGATCGTCGATCCCGACGGCAATCACGACGTCGTCGTCAACGTCCAGGGTGACCTGCCGACCATCGA CCCGGCGATCATCGCCGCTTCGGTGATGCCGCTCGCCGACCCGCAGGTCGACATCGCCACCCTCTGCGCGGTGATCCACC GGCCTGAGGAGATGGACGATCCGAACGTGGTCAAGATCATCGGCCACACGGTGGGACCCAACCGTCTGCGCGCGCTCGCC TTCACCCGCGCCCGTGCTCCCTGGGGCGACGGGCCGCTGTTCCACCATATCGGCCTCTACGCCTATCGCCGGAAGGCGCT CGCGCGCTTCGTCGCCCTGCCGCAGGGCGAACTGGAGCAACGCGAGAAGCTGGAGCAGTTGCGCGCGCTGGAGGCCGGCA TGCGCATCGACGCGATGATCGTCGAGGACCTGCCGCTCGGCGTCGATACCCCCGCCGACCTCGAGCGCGCCCGCACGCTG CTCGCCATCCGCCGCTTGAACTGA Protein sequence : MSDPLILIPARLAATRLPSKPLADIAGVPMIVHVWRRAVEAGIGPVVVATDTDAVAEVIEAQGGLAVMTRPDHPSGSDRL AEALEIVDPDGNHDVVVNVQGDLPTIDPAIIAASVMPLADPQVDIATLCAVIHRPEEMDDPNVVKIIGHTVGPNRLRALA FTRARAPWGDGPLFHHIGLYAYRRKALARFVALPQGELEQREKLEQLRALEAGMRIDAMIVEDLPLGVDTPADLERARTL LAIRRLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-26 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-26 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-26 | 42 |
