Gene Information

Name : Mext_0253 (Mext_0253)
Accession : YP_001637748.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 277465 - 278703 bp
Length : 1239 bp
Strand : +
Note : PFAM: integrase family protein; KEGG: sil:SPO1927 site-specfic recombinase, phage integrase family

DNA sequence :
GTGGGCGGCGCGAGTTGGGCGGACACTGCGATGGGTGGTAAGGGTCGGCATCCGGACAAAGCGCTCACCACCGTGCAGGT
GCGCGCCCTCAAGGTGCCCGGCCGCTATGCCGATGGCAACGGCCTCTACCTCGTCGTTGAGCCCTCGGGCTCGAAGCGCT
GGCTCCTGCGCACGATCGTCCAGGGCCGCCGCCGCGACATCGGCCTTGGCGGGGCAGGCCTCGTCACCCTAGCCGAGGCA
AGGGAGAAGGCGCTGGCCTATCGCAAGCTCGCGCGCGATGGCGGCGACCCCCTGGCCGAGCGGCGCAAGGCGCGTGCGAC
TGTGCCGACCTTCGCCGAGGCGGCCGAGCAGGTCCACGAGGAGCATAAAGCTTCCTGGAAGAACCCGAAGCACGCTGCCC
AGTGGATCACGACGCTGCGCACCTACGCGAACCCGCACCTCGGCGCTCGGCGCGTCGATCAGATCGAGACGCCCGATGTG
CTGCGCGCCCTGTCGCCGATCTGGCTGACGAAAGGGGAGACAGCTCGGCGGGTGCGCCAGCGCATCGGTACCGTTCTCGA
TTGGGCGAAGGCCGCTGGCCATCGCACTGGAGACAATCCGGTCGAGAGTGTTGCCAAGGGACTGCCGAAGCAGGGTGAGC
GTGACGAGCATCACGCCGCGCTGCCCTACGCCGAGGTCCCCGCCTTCGTTACTCGACTGCAATCGTCCGACCACGGCGAG
GCTGCCCGGCTCGCCTTCGAGTTCCTAATCCTGACGGCCGCGCGCACCAGTGAGGTACTCCGGGCCGAGTGGCGGGAGAT
CGATGAGGCCGAGGCGTTGTGGACCGTGCCCGCCGCGCGCATGAAGGCCGGGCGCGAGCACCGGGTGCCGCTCAGCAAGC
GCTCCTTGGAGATCGTGCGGCGGGCCAAACTGCTCGCCGGGGACAGCGCCTTCATCTTTCCTGGCCGCTCGACCGGCAAG
CCGATGTCGAACATGGTCTTTCTGATGGCGTTGCGGCGCATGAAGCTGACGGTCACCGCGCATGGCTTCCGCTCGTCGTT
CCGCGACTGGGCAGCGGAAGCCACGAGCCTGCCGCGTGAGGTCGCAGAGATGGCCTTGGCGCACACCATTGAGAACCGCG
TCGAGGCGGCCTATCGGCGCGGCGACCTGCTGGCGAAGCGGCGCGAGATGATGGAGCAGTGGTCCACGTTCGTCGCGAGC
AAGCCGAAGGGCGACAAGCCTCACAAGAGTTCAGCATGA

Protein sequence :
MGGASWADTAMGGKGRHPDKALTTVQVRALKVPGRYADGNGLYLVVEPSGSKRWLLRTIVQGRRRDIGLGGAGLVTLAEA
REKALAYRKLARDGGDPLAERRKARATVPTFAEAAEQVHEEHKASWKNPKHAAQWITTLRTYANPHLGARRVDQIETPDV
LRALSPIWLTKGETARRVRQRIGTVLDWAKAAGHRTGDNPVESVAKGLPKQGERDEHHAALPYAEVPAFVTRLQSSDHGE
AARLAFEFLILTAARTSEVLRAEWREIDEAEALWTVPAARMKAGREHRVPLSKRSLEIVRRAKLLAGDSAFIFPGRSTGK
PMSNMVFLMALRRMKLTVTAHGFRSSFRDWAAEATSLPREVAEMALAHTIENRVEAAYRRGDLLAKRREMMEQWSTFVAS
KPKGDKPHKSSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1120 NP_286655.1 P4 family integrase Not tested TAI Protein 5e-59 42
Z1559 NP_287063.1 P4 family integrase Not tested TAI Protein 5e-59 42
int AAL08426.1 integrase Not tested SRL Protein 8e-59 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mext_0253 YP_001637748.1 integrase family protein VFG0672 Protein 4e-59 42