Gene Information

Name : Mext_2090 (Mext_2090)
Accession : YP_001639557.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2333350 - 2334099 bp
Length : 750 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B4775 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGCTTCTGAAGGACAAAGTCTGTGTAATCACCGGCGCGGCCTCCGCGCGCGGCATCGGCAAGGCCACGGCACGCCTGTT
CGCAGCCCAGGGTGGGCGGGTGGTCATCCTCGATCTCGACGCCGGCCAGGCCGAGGCGGCGGCGCGCGAGATCGGTCCGG
GGCATTTCGGCCTCGCCTGCGACGTCGCCAACCGGACGGCCTGCCAAGCGGCCGCCGACGAGGTGATCGCCCAGGCCGGA
CGGATCGATGTCCTCGTGAACAATGCCGGCATCTCGCAGCCCCTGAAGCTGATGGAGATCGAGGCGGCGAATTACGATGC
CGTCACCGACGTCAACCTGCGCGGCACCCTCTACATGAGCCAGGCGGTGGTCCCCGCGATGCGCCGCCAGCGCACCGGCG
CGATCGTCTGCATGTCGTCGGTCTCGGCCCAGCGCGGCGGCGGCATCTTCGGCAGTCCGCATTATAGCGCCGCCAAGGCG
GGCGTGCTCGGTCTCGCCAAGGCGATGGCGCGCGAACTCGGCTCCGACGGTATCCGGGTGAATTCGGTGACGCCCGGCCT
GATCCAGACCGACATCACCGCCGGCAAGCTCACCGATGCGATGCGCGCCGAGATCGTCAGCGGCATCCCCCTCGGCCGCC
TCGGCGTCGCCGACGACGTCGCCAATGTCTGCCTGTTCCTCGCCAGCGACCTGTCCGCCTACCTCACCGGCGCGGTGATC
GACGTCAACGGCGGCATGCTGATCCATTGA

Protein sequence : 
MLLKDKVCVITGAASARGIGKATARLFAAQGGRVVILDLDAGQAEAAAREIGPGHFGLACDVANRTACQAAADEVIAQAG
RIDVLVNNAGISQPLKLMEIEAANYDAVTDVNLRGTLYMSQAVVPAMRRQRTGAIVCMSSVSAQRGGGIFGSPHYSAAKA
GVLGLAKAMARELGSDGIRVNSVTPGLIQTDITAGKLTDAMRAEIVSGIPLGRLGVADDVANVCLFLASDLSAYLTGAVI
DVNGGMLIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-69 67
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-69 67
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-69 67
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-69 67
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 5e-70 67