|
Name : Mext_1948 (Mext_1948) Accession : YP_001639418.1 Strain : Methylobacterium extorquens PA1 Genome accession: NC_010172 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 2176602 - 2177906 bp Length : 1305 bp Strand : - Note : KEGG: xau:Xaut_3551 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP DNA sequence : ATGCGCATCGCGATGATTGGCTCGGGCTATGTCGGCCTCGTGTCGGGCGCCTGCCTCGCCGATTTCGGCCACGAGGTCGT CTGCATCGACAACGATCCCGGCAAGATCGCCGCCCTCAACGAGGGCCGCATGCCGATCTACGAGCCCGGCCTCGACGCCC TCGTCGCCGAGAACGTGCGCGCCAAACGCCTCACCTTCTCCACCGACCTCAAGCCTGCCGTGGCGCAGGCGCAAGCCGTG TTCATCGCCGTCGGCACCCCGTCCCGCCGCGGCGACGGCTTTGCCGACCTCTCCTACGTCTATGCCGCGGCCCGTGAGAT CGCCGAGGCGCTCACCGGCTACACCGTGGTCGTCACCAAATCGACCGTGCCCGTTGGCACCGGCGACGAGGTCGAGCGCA TCCTGCGCGAGGCCCGCCCCGACATCGATGTCGGCGTCGCCTCGAACCCCGAGTTCCTGCGCGAGGGTGCCGCCATCGGC GATTTCAAACGGCCCGATCGCATCGTCATCGGCGCCGAGGACAACCGCGCCGCCGCCGTGATGCAGGAGGTCTACCGCCC GCTCTACCTCAACGCCGCGCCGATCCTGCTCACCGGACGGCGTACGGCCGAGCTGACCAAGTATGCCGCCAACGCGTTCC TGGCCACCAAGATCACCTTCATCAACGAGATCGCCGATCTGTGCGAGCAGGTCGGGGCCAACGTGCAGGAGGTCGCCCGC GGCATCGGCCTCGACAACCGCATCGGCGGCAAGTTCCTGCATGCGGGGCCGGGCTATGGCGGCTCGTGCTTCCCCAAGGA TACGCTGGCCCTGGTGAAGACGGCGCAGGATTACGGCACGCCGGTTCGGATCGTCGAGACGGTGGTGGCCGTCAACGATC AGAGGAAGCGCGCGATGGCGCGCAAGGTGATCGCGGCCTGCGGCGGGTCGGTGCGGGGCAAGCGGGTGGCGCTCCTGGGC CTGACGTTCAAGCCGAACACCGACGACATGCGCGACGCGCCCTCGCTGTCGATCATCGCCGGCCTGCAGGATGCGGGTGC ACAGATCGTGGCCTACGATCCCGAGGGGATGGAGCAGGCGCGACCGCTGCTTCACGGGGTCGCTTACGCCGAGGACGCCT ATGCCTGCGCCGAAGGCGCCGACGCTCTGGTGATCGTGACGGAGTGGAACGCGTTCCGGGCGCTCGATCTCGCCCGGCTC AAAGGGCTGATGCGCGCCCCCGTCCTCGTCGATCTGCGCAACGTCTACGCGCCCGCGGAGACCGAACGGCACGGCTTCGC CTATTCCGGCATCGGCGTTGCGTGA Protein sequence : MRIAMIGSGYVGLVSGACLADFGHEVVCIDNDPGKIAALNEGRMPIYEPGLDALVAENVRAKRLTFSTDLKPAVAQAQAV FIAVGTPSRRGDGFADLSYVYAAAREIAEALTGYTVVVTKSTVPVGTGDEVERILREARPDIDVGVASNPEFLREGAAIG DFKRPDRIVIGAEDNRAAAVMQEVYRPLYLNAAPILLTGRRTAELTKYAANAFLATKITFINEIADLCEQVGANVQEVAR GIGLDNRIGGKFLHAGPGYGGSCFPKDTLALVKTAQDYGTPVRIVETVVAVNDQRKRAMARKVIAACGGSVRGKRVALLG LTFKPNTDDMRDAPSLSIIAGLQDAGAQIVAYDPEGMEQARPLLHGVAYAEDAYACAEGADALVIVTEWNAFRALDLARL KGLMRAPVLVDLRNVYAPAETERHGFAYSGIGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 3e-61 | 42 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 3e-61 | 42 |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 3e-61 | 42 |
