Gene Information

Name : Mext_1933 (Mext_1933)
Accession : YP_001639403.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 2151303 - 2152931 bp
Length : 1629 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bra:BRADO1006 putative oligopeptide transport protein (ABC superfamily, atp_bind)

DNA sequence :
ATGTCCGATACGCTGCTGACCGTCGAGGATCTCTCGGTCGCCTTCCGCTCCGGGACGCGCGAGACCCGCGCGGTGGATCG
CGTCAGCTTCGCCATCGAGCGGGGCGAGACCCTGGCGCTGGTGGGCGAATCCGGCTCCGGCAAATCGGTCACCGCCCTGT
CGATCCTTCGCCTGCTCGACGGAGCGGCACACCATCCGGGCGGAAAAATCCTGTTCAAGGGGCGCGACCTGCTCACGCTG
CCCGAGCGCGAGATGCGTGCGGTGCGCGGCGCGGACATCACCATGGTGTTCCAGGAGCCGATGACCTCGCTCAACCCGCT
CCACTCCATCCAGCGGCAGATCGGCGAGGTGCTGGAGATCCACCGCGGCCTGAAGGGCAAGGCGGCGCGGGCCCGCATCC
TCGAACTCATGGATCTCGTCGGTATCCGGGACGCCGAGCGGCGGCTCGGCGCCTATCCGCACGAATTGTCCGGTGGTCAG
CGCCAGCGCGTCATGATCGCGATGGCGCTCGCCTGCGAGCCCGATCTCCTGGTGGCCGACGAGCCGACCACCGCCCTCGA
CGTCACCGTGCAGGCGCAGATTCTCGCGCTGCTGGCCGACCTGCAGAAGCGGCTCGGCATGGCGATGCTGTTCATCACCC
ACGATCTTGGCATCGTCCGGCGCATCGCCGACAGGGTCTGCGTGATGCTCGCCGGCCGGATCGTCGAGGCGGGCCCGGTC
GATCGGGTCTTCACCCGGCCCCAGCACGAATACACGCAAAGGCTGCTCGCCGCCGAGCCCACCGGCCGGGCGAACCCCGT
GCCCGATCACGCCGAAGAGCTGGTCGAGGCCGGGCCGCTCAAGGTGTGGTTCCCGCTCAAGGCGGGGCTGCTCCGGCGCA
CCGTCGGCCACGTCAAGGCGGTCGATGGGGTGCGGCTCAGGGTGCGGGCGGGCGAGACGGTCGGCGTCGTCGGCGAATCC
GGCTCGGGCAAGACCACGCTCGGCCTCGCCCTGCTGCGGCTCACCGAATCCGAGGGGCCGATCGTGTTCCTCGGGCAGCG
CATCGAGGCGCGCGGCCCCGCCCTGATGCGGCCCCTGCGCAAGGACATGCAGGTGGTCTTCCAAGACCCCTACGGCTCGC
TCTCGCCGCGCATGTCGGTCGGCGACATCGTCGCCGAGGGGTTGGCCGTGCAGGGGCTGGTGAAGGGCGGCGACGAGCGC
CGCGCCCTGGTGGCGAGGGCGCTCACCGATGTCGGGCTCGATCCGGCGGCGATGGACCGCTACCCGCACGAATTCTCCGG
TGGCCAGCGCCAGCGCATCGCCATCGCCCGCGCCATCGTCCTGAAACCCCGCTTCGTCGTCCTCGACGAGCCGACTTCGG
CGCTCGATCGCTCGGTGCAGGCGCAGATCGTGACGCTGCTGCGCGACCTCCAGCGCCAGCGGGGCATCGCCTACCTGTTC
ATCAGCCACGACCTCAAGGTGGTCCGCGCACTCTCCAACTACGTCATGGTGATGCAGCACGGCCAAGTGGTCGAGGAGGG
CCCGGCCGAAGAGATCTTTGCCGCGCCCAAGACCGATTATACCCGCACCCTGTTCGCGGCGGCCTTCGAGATGGATGCCG
CGACCACCGCCGAGATCGAGCCGGCCTGA

Protein sequence :
MSDTLLTVEDLSVAFRSGTRETRAVDRVSFAIERGETLALVGESGSGKSVTALSILRLLDGAAHHPGGKILFKGRDLLTL
PEREMRAVRGADITMVFQEPMTSLNPLHSIQRQIGEVLEIHRGLKGKAARARILELMDLVGIRDAERRLGAYPHELSGGQ
RQRVMIAMALACEPDLLVADEPTTALDVTVQAQILALLADLQKRLGMAMLFITHDLGIVRRIADRVCVMLAGRIVEAGPV
DRVFTRPQHEYTQRLLAAEPTGRANPVPDHAEELVEAGPLKVWFPLKAGLLRRTVGHVKAVDGVRLRVRAGETVGVVGES
GSGKTTLGLALLRLTESEGPIVFLGQRIEARGPALMRPLRKDMQVVFQDPYGSLSPRMSVGDIVAEGLAVQGLVKGGDER
RALVARALTDVGLDPAAMDRYPHEFSGGQRQRIAIARAIVLKPRFVVLDEPTSALDRSVQAQIVTLLRDLQRQRGIAYLF
ISHDLKVVRALSNYVMVMQHGQVVEEGPAEEIFAAPKTDYTRTLFAAAFEMDAATTAEIEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-80 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-80 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-80 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-80 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 8e-84 43