Gene Information

Name : Mext_1911 (Mext_1911)
Accession : YP_001639381.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2128071 - 2129366 bp
Length : 1296 bp
Strand : +
Note : TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: acr:Acry_2813 arsenical pump membrane protein

DNA sequence :
ATGCTCGCGCTCGCCATCTTCCTCGTCACCCTGGTGTTCGTCATCTGGCAGCCCAGGGGCCTCGGAATCGGGTGGAGCGC
GCTCGCCGGCGCTGGCGTCGCGCTGGCCACGGGCGTGATCCACCCGGGCGACATCCCGGTGGTCTGGCACATCGTCTGGG
ACGCCACCTTCACGTTCGTGGCGCTCATCATCATCTCGCTGCTGCTGGACGAGGCCGGGTTCTTCCATTGGGCCGCCCTG
CACATCGCTCGCTGGGGCGGTGGCCGGGGCCGGCGGCTGTTTCCCCTGGTGATCCTGCTCGGCGCGGCCATCGCGGCGGT
CTTCGCGAACGACGGCGCCGCGCTGTTGCTCACCCCCATCGTGCTGGCGGTCCTGCTGCGGCTCGACTTCAAGCCGGCGG
CGGCGCTCGCGTTCATCGTCGCCTGCGGGTTCGTGGCGGATTCGACGTCCCTGCCGCTGGTGATCTCGAACCTCGTCAAC
ATCGTCTCGGCCAACTTCTTCGACGTGACCTTCGGCCGGTACGCAGCCGTCATGGTGCCCGTGGACCTCGTGTCCCTGGC
GGCGACGTTATTGGTACTGTGGGCCTACTTCCGGCGTGACGTGCCGGCGACCTATCCCGTGGACGCCCTGGAACGCCCGG
CCGAGGCGATCCGCGACCCGCTCGTGTTCCGTGCGGCGTTCCCTCTGCTCGGCGTCCTGCTGCTCGCCTACTTCGTCACC
GCGCCGTTCGGGGTGCCGGTGTCGGTCGTGACCTGTGCAGGCGCCGCGGTGCTGCTGCTGCTCGCGAACCGCGGCGGGAC
CATCCCGATCCGCAAGGTTCTGACCGGGGCGCCCTGGCAGATCGTCCTGTTCAGCCTCGGCATGTACCTCGTGGTCTACG
GCCTGCGGAACGCCGGCCTGACCGACGAGCTGGCCAAGGGCTTGGTCTGGCTCGCGGGCCACGGCCCATGGGTCGCCACG
GTCGGCACCGGCTTCGCGGCGGCCATCCTATCGTCGGTGATGAACAACATGCCGAGCGTGCTGATCGGCGCGCTCTCGAT
CCAGCAGGCCCCGGACCTGTCGCCGCTGACCCGCGAACTGATGGTCTACGCCAACGTCATCGGCTGCGACCTCGGGCCGA
AGTTCACGCCCATCGGCAGCCTCGCCACGCTGCTCTGGCTGCACGTCCTCGACAGCAAGGGCCAGAGGATCACCTGGGGC
CAGTACATGAAGGTCGGCCTCGTCATCACCCCGCCGGTGCTGCTGGTGACGCTCCTCGCGCTCGCCGTCTGGCTCCCGGT
CCTCGGTCCCCAATGA

Protein sequence :
MLALAIFLVTLVFVIWQPRGLGIGWSALAGAGVALATGVIHPGDIPVVWHIVWDATFTFVALIIISLLLDEAGFFHWAAL
HIARWGGGRGRRLFPLVILLGAAIAAVFANDGAALLLTPIVLAVLLRLDFKPAAALAFIVACGFVADSTSLPLVISNLVN
IVSANFFDVTFGRYAAVMVPVDLVSLAATLLVLWAYFRRDVPATYPVDALERPAEAIRDPLVFRAAFPLLGVLLLAYFVT
APFGVPVSVVTCAGAAVLLLLANRGGTIPIRKVLTGAPWQIVLFSLGMYLVVYGLRNAGLTDELAKGLVWLAGHGPWVAT
VGTGFAAAILSSVMNNMPSVLIGALSIQQAPDLSPLTRELMVYANVIGCDLGPKFTPIGSLATLLWLHVLDSKGQRITWG
QYMKVGLVITPPVLLVTLLALAVWLPVLGPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 8e-103 63
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 3e-83 52
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-84 52
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-84 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mext_1911 YP_001639381.1 arsenical pump membrane protein BAC0577 Protein 3e-100 63
Mext_1911 YP_001639381.1 arsenical pump membrane protein BAC0578 Protein 1e-102 63
Mext_1911 YP_001639381.1 arsenical pump membrane protein BAC0031 Protein 9e-100 63
Mext_1911 YP_001639381.1 arsenical pump membrane protein BAC0576 Protein 3e-102 63
Mext_1911 YP_001639381.1 arsenical pump membrane protein BAC0574 Protein 6e-84 53
Mext_1911 YP_001639381.1 arsenical pump membrane protein BAC0575 Protein 8e-86 52