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Name : Mext_1610 (Mext_1610) Accession : YP_001639080.1 Strain : Methylobacterium extorquens PA1 Genome accession: NC_010172 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1798088 - 1799980 bp Length : 1893 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACGCACCCGTCCGTCCCAAAGATCTTCCCAACAGCAATCCCGCCAGCGTGACCACCGGCCCCGTGCAGGGCTCGCG CAAGGTCTATGCGGAGGCGCCCGGCCGCCCCGACATTCGCGTGCCCTACCGGGAGATCGCCCTCTCCGACCCGAAGGAGG AGCCGGTGCGGGTCTACGACCCGTCGGGCCCCTACACCGAGACCGATGCGGCCATCGACCTCGAGAAGGGTCTGGCCCCG GTCCGCGAGCCGTGGATCGTCGGGCGCGGCTACGCCGCCGTGAAGCCGCGCGAGGTGAAGCCGGAGGACAACGGATTCGC GGCTGCCGACAAGCTCGTGGCGCCATGCCCCGCCGAGCGGACGATCCGCCGGGCCGAGCCGGGGCAGTTGGTGACGCAGT ACGAATTCGCCCGCGCCGGGATCATCACGGAAGAGATGATCTATGTGGCGCATCGCGAGAACGCCTGCCGCGCGCAGATG CTGGAGCGGGCGCAAGCCGCGCTCGCCGACGGCGACAGTTTCGGCGCAGCGGTGCCGCCCTTTATCACGCCCGAATTCGT CCGCGACGAGGTGGCCCGCGGGCGTGCCATCATCCCGGCCAACATCAACCACCTCGAACTCGAGCCGATGGCGATCGGCC GCAATTTTTTGGTGAAAATCAACGCCAATATCGGCAACTCGGCGGTGACGTCTTCCGCGGCTGAGGAAGTCGAAAAACTG GTCTGGTCGATCCGCTGGGGTGCGGACACGGTCATGGACCTCTCGACGGGCCGCAACATCCACAACATCCGCTCGTGGAT CGTGCGCAACTCGCCCGTCCCGATCGGCACCGTGCCGATCTATCAGGCGCTGGAAAAGGTCGGCGGCGACCCGCTGAAGC TCGATTGGGAGGTGTTCAAGGACACGCTCATCGAACAGGCCGAGCAGGGCATCGACTACTTCACGATCCATGCCGGCGTG CGGCTGGCCCATGTGCCGCTGACCGCGCGGCGCACCACCGGCATCGTGTCGCGCGGCGGCTCGATCATGGCGCGCTGGTG CCTCGCCGGGCACCGCGAATCGTTCCTCTACGAGCGGTTCGACGAGATCTGCGACATCATGCGGGCCTACGACGTGTCGT TCTCGCTCGGCGACGGCCTGCGTCCCGGCTCGATTGCGGATGCCAACGACGCGGCCCAGTTCGCCGAACTGGAGACCCTG GGCGAACTCACCAAGATCGCCTGGGACAAGGGCTGCCAGACCATGATCGAGGGCCCCGGCCACGTGCCGATGCACAAGAT CAAGGTCAACATGGAGAAGCAGCTGCGCGAGTGCGGCGAGGCGCCGTTCTACACCCTCGGCCCGCTGACCACCGACATCG CGCCGGGCTACGACCATATCACCTCGGGCATCGGCGCGGCGATGATCGGCTGGTTCGGCACGGCGATGCTCTGCTACGTC ACGCCGAAGGAGCATCTCGGGCTGCCGAACCGCGACGACGTGAAGACCGGCGTCATCACCTACAAGATCGCCGCGCACGC CGCCGACCTCGCCAAGGGCCACCCCGCCGCGCAGCTCCGCGACGACGCCCTCAGCCGCGCCCGGTTCGACTTCCGCTGGG AGGACCAGTTCAACCTCTCGCTGGATCCCGACACGGCGCGCGCCTACCACGACGAGACCCTGCCGAAGGACGCGCACAAG GTCGCCCATTTCTGCTCGATGTGCGGCCCGAAATTCTGCTCGATGAAGATCACGCAGGATCTGCGCGCCGACGTGCTCGC CATGGAAGAGGCCGGCATCGTCATCGGCCAAGCCCAGCCGATGAGCGACGCCGAGCGCCAGGCCGGCATGGCGGCCAAGT CGCAGGAGTTCCTGGAAGAGGGCGGCAAGCTCTACGTCGACGCGGCGGAGTAA Protein sequence : MNAPVRPKDLPNSNPASVTTGPVQGSRKVYAEAPGRPDIRVPYREIALSDPKEEPVRVYDPSGPYTETDAAIDLEKGLAP VREPWIVGRGYAAVKPREVKPEDNGFAAADKLVAPCPAERTIRRAEPGQLVTQYEFARAGIITEEMIYVAHRENACRAQM LERAQAALADGDSFGAAVPPFITPEFVRDEVARGRAIIPANINHLELEPMAIGRNFLVKINANIGNSAVTSSAAEEVEKL VWSIRWGADTVMDLSTGRNIHNIRSWIVRNSPVPIGTVPIYQALEKVGGDPLKLDWEVFKDTLIEQAEQGIDYFTIHAGV RLAHVPLTARRTTGIVSRGGSIMARWCLAGHRESFLYERFDEICDIMRAYDVSFSLGDGLRPGSIADANDAAQFAELETL GELTKIAWDKGCQTMIEGPGHVPMHKIKVNMEKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYV TPKEHLGLPNRDDVKTGVITYKIAAHAADLAKGHPAAQLRDDALSRARFDFRWEDQFNLSLDPDTARAYHDETLPKDAHK VAHFCSMCGPKFCSMKITQDLRADVLAMEEAGIVIGQAQPMSDAERQAGMAAKSQEFLEEGGKLYVDAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 64 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 64 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 3e-178 | 61 |
