Gene Information

Name : ribD (Bpet0616)
Accession : YP_001629219.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Unknown
Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 686068 - 687210 bp
Length : 1143 bp
Strand : +
Note : -

DNA sequence :
GTGACCACCCTGACCGACCCCGACGACCTCATCTGGATGCGCCGCGCCCTGGCGCTGGCCCGCACCGTCATGTACACCAC
CACGCCGAACCCGCGTGTCGGGTGCGTGATCGTGCGCGATGGCCGGGTGCTGGGCGAGGGCGCCACCCAGCCGCCCGGTG
GGCCGCATGCCGAGATCTGCGCCTTGCGCGACGCCGCCGCGCGCGGCGAATCGGTGCAGGGCGCCACCCTGTATGTCACC
CTGGAGCCTTGCAGCCATTATGGCCGCACGCCGCCCTGCGCCGATGCCGTGGCGGCGGCGGGGCCGGCGCGGGTCGTGGT
GGCCATGGGCGATCCCAACCCGCAGGTGCGCGGCCAGGGCCTGGCGCGGCTGCGCGCGGCCGGCATCGCGGTCACCAGCA
ATGTATGCCTGGACGAGGCCCTGGAAATCAACGCCGGCTTTGTCGCGCGCATGAGCCGCGGCATTCCCTGGGCCTGGGTC
AAGATGGCCGCCTCGCTGGATGGCCGCAGCGCGCTGCACAACGGCGTATCGCAATGGATTACCGGCGAGGCAGCGCGCGC
CGACGGCCATGCCTGGCGCGCCCGCAGCTGCGTGGTACTGACCGGCATGGGCACCGTGCTGAAAGACAATCCGCGCCTGA
ACGTGCGCGCCGTCGAGACTCCGCGCGCGCCGCGCAAGGCCGTGGTGGACGGCGACTTCGCCATCCCGGAAGACGCCAGG
CTGTTCGACGGCGCCGAGGTCATCATTTTTACGGCGCGAACCGATGCGGGCAAGGCGGCCCGGCTGGCCGCGCGCAATGC
CCGCGTGGTGGCCCTGCCGGGCCAGCAAGCCGGTCGCGTAGACCTGCCGGCCATGATGCGCTGGCTGGGCGAACACGAGT
TCAACGAAGTGCACGTCGAGGCCGGCGCCGGGCTGGGCGGCGCGCTGATGTCGGCGGGCTGTATTGACGAACTGCTGGTG
TACCTTGCGCCGGTGCTGCTGGGCGACGCAGCCGCCATGCTGCGCCTGCCGCTTATCGAACATCTTGACCACGCCCGGCG
GCTCGAATTCACCGACACGGCGCGCATCGGCCCCGACTTGCGCCTGCGCGCGCGCGACTCGACGCGCTGGCAGGCGCTGC
GCGAGGCGGCCATGTGCCGTTAA

Protein sequence :
MTTLTDPDDLIWMRRALALARTVMYTTTPNPRVGCVIVRDGRVLGEGATQPPGGPHAEICALRDAAARGESVQGATLYVT
LEPCSHYGRTPPCADAVAAAGPARVVVAMGDPNPQVRGQGLARLRAAGIAVTSNVCLDEALEINAGFVARMSRGIPWAWV
KMAASLDGRSALHNGVSQWITGEAARADGHAWRARSCVVLTGMGTVLKDNPRLNVRAVETPRAPRKAVVDGDFAIPEDAR
LFDGAEVIIFTARTDAGKAARLAARNARVVALPGQQAGRVDLPAMMRWLGEHEFNEVHVEAGAGLGGALMSAGCIDELLV
YLAPVLLGDAAAMLRLPLIEHLDHARRLEFTDTARIGPDLRLRARDSTRWQALREAAMCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 7e-49 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 7e-49 41