Gene Information

Name : phoB (Bpet0481)
Accession : YP_001629084.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Resistance
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 521578 - 522276 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence :
ATGTCCAGCACCATTCTTGTCGTCGAAGACGAACCCGCCATCCAGGAGCTCATCGCCGTCAACCTGTCGTTCGCCGGCCA
CAAAGTCCTGCGCGCTTTCGACGCTGAACAGGCTCATACCCTGATCCGCGCGGAACTCCCCGACCTGATCCTGCTCGACT
GGATGCTGCCCGGCACCTCGGGCCTGACCCTGGCGCGCAAGCTGCGCGACGACGAACGCACCCGCGCCGTGCCGGTCATC
ATGCTGACCGCCAAGGGCGCCGAGCAGGACAAGGTCGAGGGTCTGGAAGCCGGCGCCGACGACTACATCACCAAGCCCTT
CTCGCCCAAGGAACTAATGGCGCGCATCAAGGCGGTGCTGCGGCGCCGCGCGCCGCAGCTCACCGACGACATCATCGATG
TCGGCGGGCTGAAGCTCGATCCCGTCACGCACCGCCTGTCGGGACACGAGCAGGCGCTGTCCATCGGACCAACCGAATTC
CGCCTGCTGCATTTCTTCATGACCCACCCGGAACGGGTCTTCTCGCGCTCGCAACTGCTCGACCAGGTGTGGGGCGACCA
CGTCTTTGTGGAAGAACGCACGGTCGACGTGCACATCCGCCGCTTGCGCAAAGCGCTGGAACCGTCGGGGCACGATGCGC
ACGTCGAAACCGTGCGCGGCAGCGGCTATCGGTTTACCGCACAGCTCCCGGCACGGTAA

Protein sequence :
MSSTILVVEDEPAIQELIAVNLSFAGHKVLRAFDAEQAHTLIRAELPDLILLDWMLPGTSGLTLARKLRDDERTRAVPVI
MLTAKGAEQDKVEGLEAGADDYITKPFSPKELMARIKAVLRRRAPQLTDDIIDVGGLKLDPVTHRLSGHEQALSIGPTEF
RLLHFFMTHPERVFSRSQLLDQVWGDHVFVEERTVDVHIRRLRKALEPSGHDAHVETVRGSGYRFTAQLPAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 3e-34 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 3e-34 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 3e-34 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 3e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_001629084.1 response regulator HE999704.1.gene2815. Protein 2e-39 45
phoB YP_001629084.1 response regulator CP001918.1.gene3444. Protein 5e-36 43
phoB YP_001629084.1 response regulator CP000647.1.gene2531. Protein 1e-35 43
phoB YP_001629084.1 response regulator NC_002952.2859905.p0 Protein 6e-39 42
phoB YP_001629084.1 response regulator NC_012469.1.7685629. Protein 2e-37 42
phoB YP_001629084.1 response regulator NC_002745.1124361.p0 Protein 4e-39 42
phoB YP_001629084.1 response regulator NC_009782.5559369.p0 Protein 4e-39 42
phoB YP_001629084.1 response regulator NC_002951.3237708.p0 Protein 4e-39 42
phoB YP_001629084.1 response regulator NC_003923.1003749.p0 Protein 4e-39 42
phoB YP_001629084.1 response regulator NC_002758.1121668.p0 Protein 4e-39 42
phoB YP_001629084.1 response regulator NC_009641.5332272.p0 Protein 4e-39 42
phoB YP_001629084.1 response regulator NC_013450.8614421.p0 Protein 4e-39 42
phoB YP_001629084.1 response regulator NC_007793.3914279.p0 Protein 4e-39 42
phoB YP_001629084.1 response regulator NC_007622.3794472.p0 Protein 5e-39 42
phoB YP_001629084.1 response regulator CP001138.1.gene2239. Protein 2e-35 42
phoB YP_001629084.1 response regulator NC_002695.1.916589.p Protein 2e-35 42
phoB YP_001629084.1 response regulator BAC0039 Protein 2e-35 42
phoB YP_001629084.1 response regulator BAC0596 Protein 2e-35 42
phoB YP_001629084.1 response regulator CP000034.1.gene2186. Protein 2e-35 42
phoB YP_001629084.1 response regulator AE000516.2.gene3505. Protein 1e-32 42
phoB YP_001629084.1 response regulator NC_014475.1.orf0.gen Protein 2e-35 41
phoB YP_001629084.1 response regulator NC_005054.2598277.p0 Protein 2e-35 41