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Name : thiC (Bpet4684) Accession : YP_001633302.1 Strain : Bordetella petrii DSM 12804 Genome accession: NC_010170 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 4941161 - 4943074 bp Length : 1914 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACGCCAATCCGAAGTTCCTTGCCGCCACGGCCGAAGTCGACGCCGCCGCGGTCGCGCCGCTGCCCAAGTCCCGCAA AGTGTATGAAACCGGCTCCCGCCCGGACATTCGCGTGCCGTTTCGCGAGATCTCGCAAGACGACACGCCGACCATGTTCG GCGGCGAGCGCAATCCACCCCTGACGGTGTACGACACCAGCGGCCCCTACACCGACCCCGACGTGCGCATCGACATCCGC CAAGGGCTGCCGGCGTTGCGCAAGGCCTGGATCGAAGAGCGCGGCGACACCGAACTGCTGGCCGGCCCCACCAGCGAATA CGGCAAGTCGCGCCTGACCGACCCCAAGCTGACGGCCATGCGCTTTGACCTGCAGCGCCCGCCGCGCCGCGCCAAGGCGG GCGCAAACGTGTCGCAGATGCACTATGCGCGCCGCGGCATCGTCACGCCCGAAATGGAATTCGTGGCCATTCGCGAGAAC CTGCGCCGCGAACAGTACCTGGAAACCCTGCGCGCCAGCGGCCCGGACGGCGAAAAGCTGGCCCGCCGCCTGCAGCGCCA GCATCCGGGGCAATCGTTCGGCGCGGCCATCCCCACCATCATCACGCCGGAATTCGTGCGCGACGAAGTGGCGCGCGGCC GTGCCATCATTCCGGCCAACATCAATCACCCCGAAGTCGAGCCGATGGCCATTGGCCGCAACTTCCTGGTGAAGATCAAC GCCAATATCGGCAATTCGGCGGTCAGCTCGGGCATCGGCGAAGAAGTCGAGAAAATGACCTGGGCGATCCGCTGGGGCGG CGACACGGTCATGGACCTGTCTACCGGCAAGCATATCCACGAGACTCGCGAGTGGATCGTGCGCAATTCGCCCGTGCCCA TCGGCACGGTGCCGATCTACCAGGCGCTGGAGAAGGTGGACGGCAAGGCCGAGGAGCTGACCTGGGAGATTTTCCGCGAC ACGCTCATCGAGCAGGCCGAGCAAGGCGTGGACTATTTCACGATTCATGCAGGCGTGCGCCTGCCGTTCATTCCCATGAC GGCCGACCGCATGACCGGCATTGTGTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTGGCACACCATAAAGAAAGCT TCCTGTACGAGCGTTTCGAAGAAATCTGCGAAATCATGAAGGCCTACGACGTCAGTTTCTCGCTGGGCGACGGCCTGCGT CCGGGATCGGGCTACGACGCCAACGACGAAGCACAATTCGCCGAGCTGAAAACCCTGGGCGAGCTGACGCAGGTGGCGTG GAAGCACGACGTGCAAGTCATGATCGAAGGGCCGGGCCACGTGCCCATGCAGATGATCAAGGAAAACATGGAGCTGCAGC TGGAACACTGCCACGAGGCGCCGTTCTACACTCTGGGACCCCTGACCACGGACATTGCTCCCGGCTACGACCACATCACT TCTGGCATTGGCGCGGCGCTGATCGGCTGGTACGGCACGGCCATGCTCTGTTACGTGACGCCCAAGGAACACCTGGGGCT GCCCAACAAGAAAGATGTGAAGGACGGCATCATCACGTACAAGATCGCCGCCCACGCGGCCGACCTGGCCAAGGGGCACC CCGGCGCGGCGATTCGCGACAACGCGCTGTCGAAGGCGCGCTTCGAATTCCGCTGGGACGACCAGTTCAACCTGGGCCTG GACCCGGACACCGCCAAGGAGTTCCACGACGAGACCTTGCCGAAGGACTCGATGAAAGTGGCACACTTCTGCTCGATGTG CGGGCCGCATTTCTGCAGCATGAAGATCACGCAGGACGTGCGGGATTATGCGGCGTCGCAGGGCGTGGCTGAGCAAGAGG CGCTACAGAAGGGAATGCAGGAGAAGGCTGTGGAGTTTGTGAAGAAGGGGGCGGAGATTTACCACCAGACTTGA Protein sequence : MNANPKFLAATAEVDAAAVAPLPKSRKVYETGSRPDIRVPFREISQDDTPTMFGGERNPPLTVYDTSGPYTDPDVRIDIR QGLPALRKAWIEERGDTELLAGPTSEYGKSRLTDPKLTAMRFDLQRPPRRAKAGANVSQMHYARRGIVTPEMEFVAIREN LRREQYLETLRASGPDGEKLARRLQRQHPGQSFGAAIPTIITPEFVRDEVARGRAIIPANINHPEVEPMAIGRNFLVKIN ANIGNSAVSSGIGEEVEKMTWAIRWGGDTVMDLSTGKHIHETREWIVRNSPVPIGTVPIYQALEKVDGKAEELTWEIFRD TLIEQAEQGVDYFTIHAGVRLPFIPMTADRMTGIVSRGGSIMAKWCLAHHKESFLYERFEEICEIMKAYDVSFSLGDGLR PGSGYDANDEAQFAELKTLGELTQVAWKHDVQVMIEGPGHVPMQMIKENMELQLEHCHEAPFYTLGPLTTDIAPGYDHIT SGIGAALIGWYGTAMLCYVTPKEHLGLPNKKDVKDGIITYKIAAHAADLAKGHPGAAIRDNALSKARFEFRWDDQFNLGL DPDTAKEFHDETLPKDSMKVAHFCSMCGPHFCSMKITQDVRDYAASQGVAEQEALQKGMQEKAVEFVKKGAEIYHQT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 74 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 74 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
