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Name : gabD1 (Bpet0472) Accession : YP_001629075.1 Strain : Bordetella petrii DSM 12804 Genome accession: NC_010170 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 511721 - 513100 bp Length : 1380 bp Strand : - Note : - DNA sequence : ATGATCGAAGTAGTCAATCCCGCCGACGGCTCGCGCGTCGGCGTAGTCCCCCACATGGACGCGGCACAGGTAAAAGCCGC CATAGACCGGACCTGCGACGCGTTTCCCGCATGGTCGCGGCGCCTGGCCAAAGAACGCGGCGACCTGCTGCGCCGCTGGT TCGAGCTGGTCCGGGACGACAAGCAGGCGTTTGCCGAAATCATGGTCCAGGAAAACGGCAAATGCCTGGCCGAGGCGCTG GGCGAGATCGACTATGGGCTGGGCTTCATCGAGTGGTATGCCGAAGAGGCCAAGCGGGTCTATGGCGACACGATTCCCTC GCACGCGCCCCACGCCACGGTCATGGTGATGAAGACGCCGGTAGGCCCCACCGCCGCCATCACCCCCTGGAACTTTCCTT TCATGATGATCACGCGCAAGGTCGCCACCGCGCTGGCGGCCGGCTGCACCATGATCATCAAGCCATCCGAAGAAACGCCG CTGACGGCCTACAAGCTTCTGGAATACGCCCGCAAGGCCGGCATCCCGGAGGGCGTATTCGAAATGGTCACGGGCAATCC GCCAGAAATCGGCGCGCTGTTCACCGGCGACGAACGCATCCGGAAGATATCGTTCACGGGCTCGACCGCCGTGGGGCGGT TGCTGGCGCAGGCCAGCGGCGCCACCCTCACGAAAATGACGCTGGAGCTGGGCGGCAACGCCCCTTTCATCGTGTTCGAT GACGCCACGCTGGAGCAGGCGGCGGCCGGCCTGGTCGCCGCCAAGCTGCGCAATTCCGGGCAGGTATGCATTTCGCCCAA CCGCATCTATGTGCATGACGGCATCTACGACCGTTTCGTGCAAGAAGTCGCCGAACGGGTAGCGCGCATCCCTGTCGACC AGGGCATGCGGCCGGACTTTGTGGTGGGTCCGCTGATCAACCAGGCCGGCCTGCAGAAGGTAGACCAGCTAGTGCAGGAC AGCCGCCGGGATGGCGCGACGGTGGTGCTGGGCGGCAGACCCCACGCCAAGGGCGGCCTGTTCTATGAGCCCACCGTGCT CACGGGCCTGAACGACGACATGCGCATCGCCCGCACCGAGATCTTCGGCCCCGTGTTCCCGTTCTATCGCTTCAGCACCG AAGACGAAGTGGTGCGCCGCGCCAACCAGACCGAATACGGCCTGGTGGCGTATGCCTACACGCGGGACGTCGGACGCGCC TTCCGGCTTGCGCGCGACATCGAGGCCGGCATGGTGATCCTGAATTCCGGATCGGTGGGCACGGCGTCGGTTCCCTTCGG GGGCGTCAAGCAGTCCGGCTATGGCCGCGAAGGCAGCCACCACGGCATCGAGGAATACGTCGATGTGCGGTACGTGCTGG CGGCCGGGCAGGACGTTTAG Protein sequence : MIEVVNPADGSRVGVVPHMDAAQVKAAIDRTCDAFPAWSRRLAKERGDLLRRWFELVRDDKQAFAEIMVQENGKCLAEAL GEIDYGLGFIEWYAEEAKRVYGDTIPSHAPHATVMVMKTPVGPTAAITPWNFPFMMITRKVATALAAGCTMIIKPSEETP LTAYKLLEYARKAGIPEGVFEMVTGNPPEIGALFTGDERIRKISFTGSTAVGRLLAQASGATLTKMTLELGGNAPFIVFD DATLEQAAAGLVAAKLRNSGQVCISPNRIYVHDGIYDRFVQEVAERVARIPVDQGMRPDFVVGPLINQAGLQKVDQLVQD SRRDGATVVLGGRPHAKGGLFYEPTVLTGLNDDMRIARTEIFGPVFPFYRFSTEDEVVRRANQTEYGLVAYAYTRDVGRA FRLARDIEAGMVILNSGSVGTASVPFGGVKQSGYGREGSHHGIEEYVDVRYVLAAGQDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-115 | 52 |
