|
Name : Bpet0453 (Bpet0453) Accession : YP_001629056.1 Strain : Bordetella petrii DSM 12804 Genome accession: NC_010170 Putative virulence/resistance : Virulence Product : NDP-sugar epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 487256 - 488245 bp Length : 990 bp Strand : - Note : - DNA sequence : ATGACTGACCATCCCCCTTCCCCGTCCGGCGCGGCCCTCGAATCGGCCCGCCGCACCCTGCACATCGAAGCCCAGGCCAT CGCCGACCTCTCGGCGCGCCTGGACGACAGCTTCGCGCGCGTGGTCGACATGCTGCTGGCCTGTCGCGGTCGGGTCGTGG TGAGCGGCATCGGCAAGACCGGCCACATCGCCCGCAAAATCGCCGCCACGCTGGCCTCCACGGGCACGCCGGCCTTTTTC GTGCACGCCGCCGAGGCCATCCACGGCGACCTGGGCATGATCACCCGCGACGACGTCCTCATCGCCATATCGCATTCCGG CTCGGGCCAGGAACTGCTCACCATCCTGCCGGCGGCCCGCCGCATGGGCGCGGGCCTGGTGGCTATTACCGGCAACCCCG CCTCGGAACTGGCCCGCCTGGCCGACCTGCACCTGGACACCAGCGTGGCGCAAGAGGCCTGCCCGCTCAACCTGGCCCCC ACCGCCAGCACCACCGCCGCGCTCGCGCTGGGCGACGCGCTGGCCGTCGCCTGCCTGGAAGCGCGCGGCTTCGGCCCCGA AGACTTCGCCCGCTCGCACCCGGGCGGCACGCTGGGCCGCCGCCTGCTCACCCATGTGCGCGACGTCATGCGCCAGGGCG CCGCGCTGCCCACCGTCAGCGAACAATCGGCGCTGTTCCCCGCACTGGAAGAAATGTCCGCCAAAGGCATGGGCATGACC ATCGTGCTCGACGCGGCGGGCAAGCCCACCGGCATCTTCACTGACGGCGACCTACGCCGCCTGATCGAACGCCACGGCGA CATCCGCAACCTGACCGTGGCGCAGGGCATGACCCGCATGCCCCGCAGCATCGGCCCCGACGCGCTGGCCGTCGAGGCGG CCCGCCAGATGGACGAGCAGCGCCTGAACCAGATGCTGGTTCTCGATTCCGACGGCGCCCTGCTGGGCGCCCTGCACATG CACGACCTGATGGCCGCCAAGGTGGTATGA Protein sequence : MTDHPPSPSGAALESARRTLHIEAQAIADLSARLDDSFARVVDMLLACRGRVVVSGIGKTGHIARKIAATLASTGTPAFF VHAAEAIHGDLGMITRDDVLIAISHSGSGQELLTILPAARRMGAGLVAITGNPASELARLADLHLDTSVAQEACPLNLAP TASTTAALALGDALAVACLEARGFGPEDFARSHPGGTLGRRLLTHVRDVMRQGAALPTVSEQSALFPALEEMSAKGMGMT IVLDAAGKPTGIFTDGDLRRLIERHGDIRNLTVAQGMTRMPRSIGPDALAVEAARQMDEQRLNQMLVLDSDGALLGALHM HDLMAAKVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-54 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-54 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 8e-55 | 44 |
