Gene Information

Name : Bpet4292 (Bpet4292)
Accession : YP_001632908.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4551717 - 4552607 bp
Length : 891 bp
Strand : +
Note : -

DNA sequence :
ATGAAGTACGCCTGGATCGAGCTTCACAGCCGACAATGGCCGGTGTCCCTGAGCTGCCAGGTGCTGGGTGTCAGCCCCAG
CGGTTACCACGCGCGCAAGGTGCGGGATGTCGATACTGACCGACCGCGCCGACGCATCAGCAACGACGCTCTGCTGGTGC
ACATCAAGGCCGTGCACGCTGAATCCAAAGGCGAGTACGGCTGGCCGCGCGTGTGGAAGCAACTGCTGGTCCAGGGCATT
CGCGTCAGCAAGGATCGTGTCCAGCGGCTCATGAAGCTGCACGGCATCAAGGCGAAGACCAAACGCCGGTTCAAGGTCAC
GACCGACAGCAAACACAGCCTGCCGGTCGCACCGGACCTGCTGCAACGAGACTTCTCTCCCGCGCGTCCCGACCAGGTCT
GGACTACGGACATCACGTACATCTGGACGGACGAGGGTTGGCTGTTTCTGACCGTCATTCTCGACCTGTTCAGCCGTCAG
GTGGTGGGCTGGTCGATGCAGCCGCACATGCGCACGGAGCTGGTGTCTGATGCGCTGCGTATGGCGTGGTTTCGCCGCCG
TCCGCAAGCGGGCCTGATCCTCCACAGTGACCGTGGCAGCCAGTATTGCAGTCATGACTTCCAGGACCTGCTCAAGGGCT
ACGGCATGCGCAGTTCGATGAGCCGTCGAGGCAATTGCTGGGACAACGCACCGACCGAGAGCCTGTGGGGATCGCTCAAG
CGTGCACGCATCCTCGGCCAGCGCTTTGCAACGCGTCGCGAAGCGATGGACGAGGTAATCGACTGGTTGAGCTTCTACAA
TCATTCGCGCTTGCACTCGACGTTGGGCTACGTCAGCCCGATGCAATTCGAGCGGGACTGGTACGCCGCCCAGAACCAAC
GGGTGGCATAA

Protein sequence :
MKYAWIELHSRQWPVSLSCQVLGVSPSGYHARKVRDVDTDRPRRRISNDALLVHIKAVHAESKGEYGWPRVWKQLLVQGI
RVSKDRVQRLMKLHGIKAKTKRRFKVTTDSKHSLPVAPDLLQRDFSPARPDQVWTTDITYIWTDEGWLFLTVILDLFSRQ
VVGWSMQPHMRTELVSDALRMAWFRRRPQAGLILHSDRGSQYCSHDFQDLLKGYGMRSSMSRRGNCWDNAPTESLWGSLK
RARILGQRFATRREAMDEVIDWLSFYNHSRLHSTLGYVSPMQFERDWYAAQNQRVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 9e-45 46
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 9e-45 46
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 9e-45 46
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-53 45
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-53 45
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-53 45
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-53 45
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-51 44
unnamed AAF09022.1 unknown Not tested SHI-O Protein 3e-53 44
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-53 44
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-53 44
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-53 44
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-42 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 4e-41 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-41 41
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-41 41
tnpB CAB61574.1 transposase B Not tested HPI Protein 9e-38 41
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 5e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bpet4292 YP_001632908.1 transposase VFG1706 Protein 8e-54 45
Bpet4292 YP_001632908.1 transposase VFG1631 Protein 8e-43 42