Gene Information

Name : Bpet4265 (Bpet4265)
Accession : YP_001632881.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 4524784 - 4527693 bp
Length : 2910 bp
Strand : -
Note : -

DNA sequence :
ATGCGCTGGAAAATCCCCAGACCGAAGCCGACCGCGCCGAAGCTGGCCGCATCCGATGCTGACGACGACGAGCAGCCGGA
CGGCTGGCAACGCCACGTCGAGGCACTGCGCCAGGCCGGCATCCCCGAACCCGGCACGGCGGTGCAAGGCCGCAGGCCGG
CGACCCTGGCAGACGAGCAGGCGCTGTACGAGGTCGCGCCGTCGTTCGTGGAACTGCTGCCCTGGGTGGAGTTCCTGGCG
CAGTCGAAAGCCATGTTGCTGGAGGACGGGCAATCGGTGGCGGCGTTCTACGAGCTGGTGCCGCTGGGCACCGAAGGCCG
GGAACCTGGCTGGCTCGCGCAGGCCCGCGATGCCTTGGAAAACGCGCTGCAGGACAGTTTCGATGAACTGGATGAGAACC
CCTGGGTGCTGCAGCTCTACGCTCAGGACGAGCCCAGTTTCGACCAGTACATGCAGACCCTGCGCGACTATGTGCAGCCG
CGCGCCCGTGAGACGGCGTTCACCGAGTTCTACCTGCGCTTCTTCGGCCATCACCTGCGCGCGGTGGCCAAGCCGGGCGG
TCTGTTCGAGGACACGGTGGTCACACGGCTGCGCTGGCGCGGCCAGACCCGGCGTGTGCGCATGGTGGTCTATCGCCGCG
TGACCGGCCAAGGGCAAAACAGCCGCCGCGGGCAGACGCCCGAGCAGATGCTCAATATCGTTTGCGACCGCCTGTGCGGC
GGACTGGCGAACGCCGGCATTCAGGCCCGGCGCATGGTGGCTGCGGATGTTCACGACTGGCTGCTGCGCTGGTTCAACCC
GCGTCCCACGTTGCTTGGGCCTGGGGCCGAAGACAGGGAGCGCTTCTATGCGCTGGCGCGCTACCCCGACAGTACGGAGG
CCGGCGAAGACGGCGAGATCGAATTGGCGAGCGGGCGGGATTTCAGCCAGCGGCTGTTCTTCGGCCAGCCGCGCTCCGAC
GTGGCGCAGGGCACCTGGCATTTCGACGGCCTGCCGCACCGCGTGCTGATCACCGACCGCCTGCGCATGCCGCCGGGCAC
AGGGCACCTGACCGGCGAGACACGCAAAGGCGATGCCATCAACACGCTGTTCGACCAGATGCCCGAGGACACCACCCTTT
GCCTGACGATGGTCGCCACGCCGCAGGATGTCCTTGAGGCGGACTTGAACCACCTGGCCAAGAAAGCGGTCGGCGAAACC
CTGGCGTCGGAGCAGACGCTCAAGGACGTGCATGAAGCCCGTTCCCTGATCGGCAGCGCGCACAAGCTCTATCGCGGCAC
GCTGGCGTTCTACCTGCGCGGGCGCGATGAGGCGGAACTGGACCGACGCGGCCTGGATCTGGCGAACGTCATGCTCAACG
CTGGCCTGCAGCCGGTGCGCGAGGACGACGAGGTGGCACCGCTCAACAGCTACCTGCGCTGGCTGCCGTGCTGCTACAAC
CCCGGCCAGGATCGGCGCAAGTGGTACACCCAACTGATGTTCGCCCAGCACGCGGCGAACCTCTCGCCGGTGTGGGGCCG
CGCCCAGGGTACGGGGCACCCCGGCATCACGATGTTCAACCGCGGCGGCGGGCCGATCACCTTCGACCCGCTCAACCGCC
TGGACCGGCAGATGAACGCCCACCTGTTCCTGTTCGGCCCGACGGGTTCGGGCAAGTCGGCGACCCTCAACAACCTCTTG
AATCAGGTCACGGCGATCTACCGACCCCGCCTGTTCATTGTCGAGGCCGGCAACAGCTTTGGCTTGTTCAGCGACTTTGC
CCGGCGCCTGGGCCTGACCGTGAACCGGGTCAAGCTCGCGCCGGGCTCGGGCGTTACCCTGGCGCCGTTCGCGGATGCGC
GCCGGCTGATCGAGACGCCCAGCGACGTGCAGACGCTCGACGCCGATGCCCTGGACGAAGACCTGCCGCCCGATGCTGTG
GCCATGGAGGCAGATGAGCAGCGCGACGTACTGGGCGAATTGGAGATCACCGCGAGGCTGATGATCACCGGTGGCGAAGA
CAAGGAAGAAGCCCGGATGACGCGGGCCGACCGCTCGCTGATCCGTCAGTGCATCCTCGATGCCGCAGAACACTGCCACA
GCAAGGATGGCGAGAAGCGCACCGTGCTCACGCGCGATGTGCGCAATGCGCTGCGCACGCGCAGCCAGGACCCGACGCTG
CCGGAAATGCGGCGTGTGCGACTGCTGGAGATGGCCGACGCCATGGACATGTTCTGCCAAGGCACGGACGGTGAAATGTT
CGACCGCGACGGTTCGCCGTGGCCCGAGGCCGACATCACCCTGGTCGATCTGGCGACCTATGCCCGCGAGGGCTACAACG
CGCAGCTCTCCATTGCCTACATAAGCCTGATCAGCACGGTGAACAACATTGCCGAGCGCGATCAGTACCTGGGCCGCCCG
ATCATCAACGTCACCGACGAAGGGCACATCATCACCAAGAACCCGCTGCTCGCCCCCTACGTGGTGAAGATCACCAAGAT
GTGGCGCAAGCTGGGGGCCTGGTTCTGGCTCGCCACACAAAACATCGACGATCTGCCGCGCGCCGCAGAGCCCATGCTCA
ACATGATCGAGTGGTGGATCTGCCTGTCGATGCCACCCGATGAGGTGGAGAAGATCGCCCGCTTCCGCGAACTCTCGCCT
GCGCAGAAGGCGCTGATGCTTTCGGCGCGCAAGGAAGCCGGGAAGTTCACCGAGGGCGTCATCCTCTCCAAGAGCCTGGA
AGTGCTGTTTCGGGCCGTGCCACCGAGCCTCTATCTCGCGCTTGCGCAGACCGAACCCGAGGAGAAAGCCGAGCGTTACC
AACTCATGCAACAGCACGGCATCAGTGAACTCGACGCGGCCTTCAAGGTGGCCGAGAAGATCGACCAGGCGCGCGGCATC
GAGTCGCCGGCCTTGGGCCTGCCGCAATAG

Protein sequence :
MRWKIPRPKPTAPKLAASDADDDEQPDGWQRHVEALRQAGIPEPGTAVQGRRPATLADEQALYEVAPSFVELLPWVEFLA
QSKAMLLEDGQSVAAFYELVPLGTEGREPGWLAQARDALENALQDSFDELDENPWVLQLYAQDEPSFDQYMQTLRDYVQP
RARETAFTEFYLRFFGHHLRAVAKPGGLFEDTVVTRLRWRGQTRRVRMVVYRRVTGQGQNSRRGQTPEQMLNIVCDRLCG
GLANAGIQARRMVAADVHDWLLRWFNPRPTLLGPGAEDRERFYALARYPDSTEAGEDGEIELASGRDFSQRLFFGQPRSD
VAQGTWHFDGLPHRVLITDRLRMPPGTGHLTGETRKGDAINTLFDQMPEDTTLCLTMVATPQDVLEADLNHLAKKAVGET
LASEQTLKDVHEARSLIGSAHKLYRGTLAFYLRGRDEAELDRRGLDLANVMLNAGLQPVREDDEVAPLNSYLRWLPCCYN
PGQDRRKWYTQLMFAQHAANLSPVWGRAQGTGHPGITMFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNLL
NQVTAIYRPRLFIVEAGNSFGLFSDFARRLGLTVNRVKLAPGSGVTLAPFADARRLIETPSDVQTLDADALDEDLPPDAV
AMEADEQRDVLGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAEHCHSKDGEKRTVLTRDVRNALRTRSQDPTL
PEMRRVRLLEMADAMDMFCQGTDGEMFDRDGSPWPEADITLVDLATYAREGYNAQLSIAYISLISTVNNIAERDQYLGRP
IINVTDEGHIITKNPLLAPYVVKITKMWRKLGAWFWLATQNIDDLPRAAEPMLNMIEWWICLSMPPDEVEKIARFRELSP
AQKALMLSARKEAGKFTEGVILSKSLEVLFRAVPPSLYLALAQTEPEEKAERYQLMQQHGISELDAAFKVAEKIDQARGI
ESPALGLPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 96
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 79
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 66
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 61
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 60
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 60
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 52
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 52
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 52
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 52
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 51
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 48