Gene Information

Name : wbpP (Bpet4029)
Accession : YP_001632645.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Virulence
Product : NDP-sugar epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 4257422 - 4258447 bp
Length : 1026 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGATCGCTACCAACGCATCCAGCAGGAACTGCGCCAGGCGCCCCGCAAGTGGCTGGTGACCGGCTGCGCCGGATT
CATCGGGTCGAACCTGCTTGAAACCCTGCTCAAGCTCGACCAGACCGTGGTGGGCCTGGACAACTTCGCCACCGGGCACC
GGCACAACCTGGATGAAGTCCGCAATTCGGTCGAGCCTGCCCAGTGGGCGCGCTTTACCTTCGTGGAAGGCGATATCCGC
GACCTGGCTGCGTGCCAGCGGGCCGCCGAAGGCGTCGACCACGTGCTGCACCAGGCCGCGCTGGGCTCGGTGCCGCGCTC
GCTGAACGACCCGATCACCACCAACGATGTCAATATCGGCGGCTTCCTGAACATGTTGGTGGCCGCGCGCGACGCCAAGG
TCAAGACCTTCGTCTATGCCGCGTCCAGCTCCACCTACGGCGACCATCCCGGGCTGCCCAAGGTCGAAGACACCATCGGC
AAGCCGCTGTCGCCGTACGCCGTGACCAAGTACGTCAACGAGCTCTACGCCGACGTGTTCGCGCGTTCGTACGGCCTGGC
CAGCGTGGGGTTGCGCTACTTCAACGTGTTCGGCAAGCGCCAGGACCCGGAAGGCGCCTACGCGGCGGTGATCCCCAAAT
GGACGGCCGCCATGATCCGCGGCGACGACGTGGTCATCAATGGCGACGGCGAAACCAGCCGCGATTTCTGCTTTGTTGAA
AACGCGGTACAGGCGAACCTGCTGGGCGCGCTGGCCCCCGAAGAGGGCGTGAACCAGGTCTACAACGTGGCGTACGGCGG
CCGCACCACGCTCAACCAGCTGTACAAGTTCCTGGCCCAGACGCTGGGCGGCGAGGGCGTGCGCTACGACAAACCGCCGG
TATATGCCGATTTCCGCGCGGGCGACGTGCGCCATTCGCAGGCCGACATAGCCAAGGGGGGTAAGCTGCTGGGCTACCAG
CCGGCCTACGACATCCTGCGCGGGCTGCAAACCGCCATGCCCTGGTATATCCGGTTCCTGCGTTGA

Protein sequence : 
MTDRYQRIQQELRQAPRKWLVTGCAGFIGSNLLETLLKLDQTVVGLDNFATGHRHNLDEVRNSVEPAQWARFTFVEGDIR
DLAACQRAAEGVDHVLHQAALGSVPRSLNDPITTNDVNIGGFLNMLVAARDAKVKTFVYAASSSTYGDHPGLPKVEDTIG
KPLSPYAVTKYVNELYADVFARSYGLASVGLRYFNVFGKRQDPEGAYAAVIPKWTAAMIRGDDVVINGDGETSRDFCFVE
NAVQANLLGALAPEEGVNQVYNVAYGGRTTLNQLYKFLAQTLGGEGVRYDKPPVYADFRAGDVRHSQADIAKGGKLLGYQ
PAYDILRGLQTAMPWYIRFLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-102 62
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-102 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpP YP_001632645.1 NDP-sugar epimerase VFG0430 Protein 4e-103 62