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Name : virB4 (Bpet3705) Accession : YP_001632316.1 Strain : Bordetella petrii DSM 12804 Genome accession: NC_010170 Putative virulence/resistance : Virulence Product : type IV secretion system protein VirB4 Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 3916385 - 3918829 bp Length : 2445 bp Strand : + Note : - DNA sequence : ATGAATGCTGCTACCACCCTGGCCGTGGATGAACGGCGCGTCTCGCGTTATCTGCCCTATTCCCACCATGTCACCGACCA GATCATTGCCTGCGACAACCATGAATACCTGGCGGTCATCAAAGTAACAGGCCGCGCGCCGGATGCCTATGCACAAGATG AGCTGAAAGATTGGATCGAAGCGCTGCATAACGTACTACGCGGCCTACCCATGGGATCGCTGGGCCTGTACTCCCACATC GTGCGCCGCCGCGTCACGGAATATCCCGACAGCACCTTTAACCAGCCCTTTGCCTCCCGATTCGATGCCGCCTACCGTGC TACGTTCGATGCCTCGGGCCTCATGATCAACGACCTTTATCTGACGGTGCTCATCCACCCGGTACAGGATCCGATACTGG GCACGTTCGCCAGTCTGGAAAAAGCCGACGCGCAACACATTGCGCACTGGCAGGCCGAATCCATCGAACGCCTGAACGGC ATCATACGTGCCTTGAGCGCGGGCCTGTACCGCTACGATCCGCAAACCCTGGGCATCGTAGATCGCAAGGGCTTCGCCTT CAGCGAAGCTGCCGAGTTCCTGGGATTTCTGCTTTCCGGCACACACCGGCCCGTACCAATCAGTCGGGAACGCTTGCGTG ACACCCTGCCCTACGCCAGACCGATCTTTGGCCGTCATGGAGAGTTGGGGGAACTGCGTACCGTCGCCAGCTCTCGCATC TTCGGCATGATGGAGCTGCGCGACTACCCGGAAGCGACAAAACCGGGACACCTGGATCGGCTGCTGGGACTGCCCCACGA ATTCGTGCTCACTCAATCGTGGGGCAGCCATACCGGAGCGGCAGCCAAAAAGCTGGTCAAGAAGCATCACAAGTTGCTGG TCGATTCCGGCGACGATTCGATCAGCCAGGTCACCCAACTGACTGAGGCCATGGACGATCTGACGTCAGCTCGCCTGGGC CTGGGCGATCATCACGCCACGATGCTGATTTATGGTGACACGGCTGAAGGGGTGCGTCAGGCCTTGGCCCAGACCGCCAC GGCGCTGGCCGAAGAGGCAGTCGGCTTCCGGCCACTGGATCGAGCGCTGGAAGCCGGGTTCTGGGCGCAACTGCCCGGTA ACTGGCACTGGCGGCCACGTCCGGTGCCCATCACCTCGCTCAACTTCCTGTGCTTTTCCAGCCTGCATAACCAGCTGACC GGCAAACCGGTCGGCAACCCCTGGGGGCCAGCGGTCACGCTGCTCAAAACCCAGACAGGTAGTCCGTTCTTCTTCAACTT TCATGCCTCTACTGAGGACTTGGACGAAACCGGAAAACGTCGTCCGGGCAACACCATGATCATTGGGATGACCGGCACGG GTAAAACCGTGCTGCAGGGAATGCTGCTTACCCAGGCGCAGAAGTTTGGCGCAACGTGTGTTGTCTGGGACAAGGATCAG GGCATGCAGGTGCTCATCATGGCGCTGGGGGGCCGCTACTTCAACATCCGACTTGGTGAAGCAACAGGCTGGAATCCGTT CCAGATGGAGCCCACCAAAGGCAACGTCGCCTTTATGGTCCGCCTGGTCGTATTTCTGGCCGAGCGCCGGGGCGAAGCAG TCACCACACGACAGCAGGCCGATATCACCCAGGCCGTGCAACAACTGACCACACTGATCGACCGGGAGGCCCGCACGCTA TCGACCTTGAATACCTTGCTGCCCAACCCGTACAGCGACGATGAAACCACGAGCACCATCCATGCTCGCTTGGCCCCGTG GTGCCAGAGCGGTGAATACGGCTGGGTGTTCGATAACCCGGCCGATGAACTGAGTCTAGCCACCGACACGGGCAAACCCG CCATCTTCGGATTTGATCTGACCGAGCTGCTCGATGATGGCGCGGTACGGGGCGCAGCCACGATGTATCTGAAGCACCGC ATTGATGCCCTGCACGACGGCCGGCGCATCATCAACCTATACGACGAATGCCAGCACCCATTAAAGGACAGACATTTTCA AGAAGATATGCAAGATGCCAGCCGCACCATCCGCAAGAAAAACGGCGTGCTGGCCTTCGCTACCCAGGAGCCAGGCGCCA TCACGGAAAACCCGGTCGGCCCCTCTTTGGTCCAGCAGACAGCCACCTTGATTCTGCTGCCGAACCCCAGAGCCAAGGCC CGCGACTACATCGAGGGCTTCGGCCTGTCGCCTACTGAATTCGAACTGTTGAAGTCTTTGGGCGAGGCCAGCCGCAAGTT CCTTGTCAAGCAAGGTTCAAGCGTCACGGTCGCGCAACTGGACTTGTCCGGCTGCGAAGACGAACTGCTGGTGTTTTCCG GCAGTTCCGACATGGCTGCGATAGCCGAACAGGCAGTGGCCCAGGCCGGGCATGATCCAGTCGCTTGGTTGCCTGTGTAC CTGGACCTCGTTAAACAAAGCCGCCAGACAACCGCGATCTCATAA Protein sequence : MNAATTLAVDERRVSRYLPYSHHVTDQIIACDNHEYLAVIKVTGRAPDAYAQDELKDWIEALHNVLRGLPMGSLGLYSHI VRRRVTEYPDSTFNQPFASRFDAAYRATFDASGLMINDLYLTVLIHPVQDPILGTFASLEKADAQHIAHWQAESIERLNG IIRALSAGLYRYDPQTLGIVDRKGFAFSEAAEFLGFLLSGTHRPVPISRERLRDTLPYARPIFGRHGELGELRTVASSRI FGMMELRDYPEATKPGHLDRLLGLPHEFVLTQSWGSHTGAAAKKLVKKHHKLLVDSGDDSISQVTQLTEAMDDLTSARLG LGDHHATMLIYGDTAEGVRQALAQTATALAEEAVGFRPLDRALEAGFWAQLPGNWHWRPRPVPITSLNFLCFSSLHNQLT GKPVGNPWGPAVTLLKTQTGSPFFFNFHASTEDLDETGKRRPGNTMIIGMTGTGKTVLQGMLLTQAQKFGATCVVWDKDQ GMQVLIMALGGRYFNIRLGEATGWNPFQMEPTKGNVAFMVRLVVFLAERRGEAVTTRQQADITQAVQQLTTLIDREARTL STLNTLLPNPYSDDETTSTIHARLAPWCQSGEYGWVFDNPADELSLATDTGKPAIFGFDLTELLDDGAVRGAATMYLKHR IDALHDGRRIINLYDECQHPLKDRHFQEDMQDASRTIRKKNGVLAFATQEPGAITENPVGPSLVQQTATLILLPNPRAKA RDYIEGFGLSPTEFELLKSLGEASRKFLVKQGSSVTVAQLDLSGCEDELLVFSGSSDMAAIAEQAVAQAGHDPVAWLPVY LDLVKQSRQTTAIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trwK | YP_001610476.1 | TrwK protein | Virulence | Not named | Protein | 2e-165 | 46 |
| trwK | CAD42844.1 | TrwK protein | Not tested | trw-PAI | Protein | 1e-165 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| virB4 | YP_001632316.1 | type IV secretion system protein VirB4 | VFG2259 | Protein | 4e-166 | 46 |
