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Name : gabD2 (Bpet3404) Accession : YP_001632015.1 Strain : Bordetella petrii DSM 12804 Genome accession: NC_010170 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 3587469 - 3588938 bp Length : 1470 bp Strand : + Note : - DNA sequence : ATGTCGCAATTGCCCCAACCGCTCAAGCGCGCCGAGCTGCTGCGCGACGCCTGCTACATCGACGGCAAATGGGTGGGCGC CAGCGGCGGCGCCACCATCCCCGTCGACAACCCGTCCACGGGCAAAACCATTGTGTCGGTGCCCAAGCTGGGCCGCAAGG AAACCGAACAGGCCATCGCCAGCGCCGAAGCCGCCCTGCCCGCCTGGGCGGCCAAGACGGGCAAGGAACGCGCCGCGATC CTGCTGAAATGGGCCCAGCTGATGATGGCCAACCAGCAAGACCTGGCCATCATCATGACCTCGGAACAAGGCAAACCGGT TACCGAAGCCGCCGGCGAAATCGCCTATGCCGCCTCGTTCCTGGAATGGTTTTCCGAAGAAGCCAAGCGCATCGACGGCG ACGTGCTGCAAAGCCCCAAGGCCGGCCAGCGCCTGATGGTGTTGAAGCAGCCCATCGGCGTCACCGCCGCCATCACTCCG TGGAACTTCCCGGCCGCGATGATCACGCGCAAGGCCGGGCCGGCGCTGGCCGCCGGCTGCACCATGGTGGTCAAGCCGGC GCAACAGACGCCCCTGACCGCGCTGGCCCTGGCCGTGCTGGCCGAAGAAGCCGGCGTGCCGCCCGGCGTGTTTCACGTCA TTACCGGCAGCTCGCGCGAGATCGGCGCGGCGCTGTGCGAAAGCGATGCCGTGCGCAAGCTGAGCTTCACCGGCTCGACC GAAGTGGGCCGCACGCTGATGGAGCAGTGCGCCCCCACTATCAAAAAACTGTCGCTGGAACTGGGCGGCAATGCGCCTTT CATCGTGTTCAACGACGCCGACCTCGACCGCGCGGTCGACGGCATCCTGGCCTCGAAGTACCGCAACGCCGGCCAGACCT GCGTGTGCGCCAACCGCATCTACATCCAGTCGGGCGTGTACGAAGACGTGCTCAAGCGGCTGACCGCCAAGGTCGAGGCC ATGAAAGTGGGCGACGGCTTTGCCGACGGCGTGACGCAAGGTCCGCTGATCGACAGCAACGCGGTGGCCAAGGTGCAGGA ACACATCGCCGACGCCACCCAGCATGGCGCCAAGGTGGTAACCGGCGGCAAGCCGCACGCGCTGGGTGGCACGTTCTTCC AGCCCACCATCGTGCGCGACGTGACCCCGTCGATGCGCTTCGCCACCGAAGAAACCTTCGGCCCGGTGGCGCCGCTGTTC AAGTTCGAGACCGAAGAAGAAGTGCTCAAGCAGGCCAACAACACCATCTTCGGGCTCGCGGCCTACTTCTACACGCGCGA CTACGCGCGCGTGTGGCGCGTATCCGAAGCGCTGGAATACGGCATCGTGGGCATCAACACCGGCATCATCTCGAACGAGG TCGGTCCCTTCGGCGGCGTGAAGCAATCGGGCCTGGGCCGCGAAGGCTCGAAGTACGGCATCGAGGAATACCTCGAACTG AAGTACCTCTGCCTGGACCTGGGCGCCTGA Protein sequence : MSQLPQPLKRAELLRDACYIDGKWVGASGGATIPVDNPSTGKTIVSVPKLGRKETEQAIASAEAALPAWAAKTGKERAAI LLKWAQLMMANQQDLAIIMTSEQGKPVTEAAGEIAYAASFLEWFSEEAKRIDGDVLQSPKAGQRLMVLKQPIGVTAAITP WNFPAAMITRKAGPALAAGCTMVVKPAQQTPLTALALAVLAEEAGVPPGVFHVITGSSREIGAALCESDAVRKLSFTGST EVGRTLMEQCAPTIKKLSLELGGNAPFIVFNDADLDRAVDGILASKYRNAGQTCVCANRIYIQSGVYEDVLKRLTAKVEA MKVGDGFADGVTQGPLIDSNAVAKVQEHIADATQHGAKVVTGGKPHALGGTFFQPTIVRDVTPSMRFATEETFGPVAPLF KFETEEEVLKQANNTIFGLAAYFYTRDYARVWRVSEALEYGIVGINTGIISNEVGPFGGVKQSGLGREGSKYGIEEYLEL KYLCLDLGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-136 | 62 |
