Gene Information

Name : dnaB (Bpet3052)
Accession : YP_001631662.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 3200308 - 3201681 bp
Length : 1374 bp
Strand : -
Note : unwinds double stranded DNA

DNA sequence :
ATGAACAATCCCGCCGATTCCCAGCTAGATTACCTGCGCGTGCCGCCGCATTCCATCGAGGCCGAGCAGTCGGTGCTGGG
AGGGCTGCTGCTGGACAACAGCGCCTGGGACCGCATTGCCGACGTGCTGGGCGAGGAAGACTTCTACCGCCATGACCACC
GCCTGATCTGGCACCACATCGCCAGGCTGGTCGGGCTGGCGCGGCCAGCCGATGTCATTACGGTGAATGAATCGCTGGTC
AGCGCCGGCAAAGCCGAAGAAACGGGAGGGCTGGCCTACCTGAACGCGCTGGCCCACAACACCCCCTCGGCCGCCAACAT
CCGCCGCTACGCCGAGATCGTGCGCGAACGCGCCATGCTGCGCAAGCTGGTGACGATTGCCGACGAGATATCTTCGGCCG
CGCTGAATCCGCAGGGCAAAGAAGCCCGCCAGTTACTCGACGAGGCTGAATCCAAGGTATTCAAAATTGCCCAGGAGGGC
GAGAAAGGCTCGGTGGGTTTCCAGGAAATCCAGCCCCTGCTGACGCAAGTGGTCGAGCGCATCGACGAGCTATACCATCG
CGAAGGCGATTCCGACGTAACCGGCGTTCCCACCGGGTTTTCCGACCTCGACAAAATGACGTCGGGCCTGCAGCCGGGCG
ACCTGGTCATCGTGGCCGGCCGCCCCTCGATGGGCAAGACCTCGTTCTCGATGAACATAGGCGAACACGTGGCCATTGAA
CAGGGGTTGCCGGTAGCCGTGTTCTCGATGGAAATGGGTGCCGTGCAGCTGGCCATGCGTATGCTGGGTTCGGTGGGCAT
GCTCGACCAGCATCGCATGCGTACAGGCAAGCTGGTGGCCGACGACTGGCCGCGCGTGACGCACGCGGTACAGCTCATGC
AGGACGCCCAGGTGTACATTGACGAAACGCCCGCGCTCAGCGCCATGGAAGTGCGGGCGCGCTCGCGCCGCCTGGCGCGC
CAGTGCGGCCAGCTGGGCCTGATCATCATCGACTACCTGCAGCTGATGGCCGGCAATGGCGGGGGCGAGAACCGCGCGAC
TGAAATCTCGGAAATCAGCCGCTCGCTGAAAGGCCTGGCCAAAGAACTGAACTGTCCGCTGATCGCGCTGTCGCAGCTTA
ACCGCAGTCTGGAACAGCGCCCCAACAAGCGCCCCGTGATGAGCGACTTGCGCGAATCGGGCGCCATCGAACAGGACGCC
GACTTGATCCTGTTCATTTACCGCGACGAAGTCTACAACCCCGATTCTCCCGACAAGGGCACCGCCGAGATCATCGTGGG
CAAGCAGCGTAACGGCCCCATCGGCACCGTGCGCCTGACCTTCCAGGGTTCCAGCACGCGCTTCCTGAATTTCACGGCCG
CGCCGCAGTACTAG

Protein sequence :
MNNPADSQLDYLRVPPHSIEAEQSVLGGLLLDNSAWDRIADVLGEEDFYRHDHRLIWHHIARLVGLARPADVITVNESLV
SAGKAEETGGLAYLNALAHNTPSAANIRRYAEIVRERAMLRKLVTIADEISSAALNPQGKEARQLLDEAESKVFKIAQEG
EKGSVGFQEIQPLLTQVVERIDELYHREGDSDVTGVPTGFSDLDKMTSGLQPGDLVIVAGRPSMGKTSFSMNIGEHVAIE
QGLPVAVFSMEMGAVQLAMRMLGSVGMLDQHRMRTGKLVADDWPRVTHAVQLMQDAQVYIDETPALSAMEVRARSRRLAR
QCGQLGLIIIDYLQLMAGNGGGENRATEISEISRSLKGLAKELNCPLIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDA
DLILFIYRDEVYNPDSPDKGTAEIIVGKQRNGPIGTVRLTFQGSSTRFLNFTAAPQY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 6e-104 52
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-87 48
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-88 48
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 4e-90 47
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 9e-90 47
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-88 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-83 45
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-83 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-73 42