Gene Information

Name : lolD (Bpet2763)
Accession : YP_001631373.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATPase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2904528 - 2905235 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence : 
ATGACTGATGCCCTGTTTACTCCGGCCGGCGACACCGCGGCGCTGCAGGCTCGCAATCTGGTGAAAACCTACGACGAAGG
CCCGGCGCGCATCCAGGTGCTGAATGACGTCAGCCTGACCGTCGCGCGTGGTGAGATGGTGGCCATTGTGGGGGCGTCGG
GCTCGGGCAAGAGCACGCTGCTGCACATACTGGGCCTGCTCGACGTGCCCAGCAGCGGCGAGGTCACGGTCGACGGCGTG
GCGGCCGCCGGTTTGTCCGAAGGGCAGAAAAGCGCCCTGCGCAATCGCAGCCTGGGGTTCGTCTACCAGTTCCATCATCT
GTTGCCCGAGTTTTCGGCGCTGGACAATGTCGCCATGCCGCTCATCGTGCGTCGCGAACAGCGCGACACCGCGCGCGAGG
CGGCCCGCAAAGTACTGGCGCTGGTGGGCCTGGCGCAGCGCGAAGGGCATTTCCCGGGCCAGTTGTCGGGCGGCGAACGC
CAGCGCGTGGCGCTGGCGCGCGCGCTGGTCACGCGGCCGGCCTGCGTGCTGGCCGATGAGCCCACCGGCAACCTCGACCG
CGGCACCGCGCACAAAATGTTCGAGCTGCTGACCCAGGTGAACCGCGAGTCGGGCACGGCATTTGCCATCGTGACGCACG
ATGCCGAACTGGCCGCGCTGGCCGACCGCCAACTGCTCATGGAACGCGGGCAGCTGGTTTCGGGGTAG

Protein sequence : 
MTDALFTPAGDTAALQARNLVKTYDEGPARIQVLNDVSLTVARGEMVAIVGASGSGKSTLLHILGLLDVPSSGEVTVDGV
AAAGLSEGQKSALRNRSLGFVYQFHHLLPEFSALDNVAMPLIVRREQRDTAREAARKVLALVGLAQREGHFPGQLSGGER
QRVALARALVTRPACVLADEPTGNLDRGTAHKMFELLTQVNRESGTAFAIVTHDAELAALADRQLLMERGQLVSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_001631373.1 lipoprotein releasing system ATPase component NC_012469.1.7686878. Protein 7e-41 46
lolD YP_001631373.1 lipoprotein releasing system ATPase component NC_008702.1.4606598. Protein 1e-30 44
lolD YP_001631373.1 lipoprotein releasing system ATPase component NC_012469.1.7685735. Protein 7e-35 41