Gene Information

Name : rph (Bpet2268)
Accession : YP_001630879.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2351017 - 2351757 bp
Length : 741 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
GTGTCTTCTTCCACCGCTTCTGCCGTGGCGCGCCCGTCCGGCCGCGCTGTCGATCAATTGCGCCCCTTCAGCCTGCAGCG
CGGCTACACCCGCTATGCCGAGGGCTCGGTGCTGGTGCGCGCCGGCAACACGCACGTGCTATGCACCGCCAGCGTGCTCG
ACAAGGTGCCGCCGTTCCTGAAAGGGCGGGGCGAGGGCTGGGTGACCGCCGAATACGGCATGCTGCCGCGCGCCACCCAC
ACGCGCGGCGACCGCGAGGCCGCGCGCGGCAAGCAAAGCGGCCGCACGCAGGAAATCCAGCGCCTGATTGGCCGCAGCCT
GCGCGCGGTGTTCGACATGAAGGCCCTGGGCGAGCGCACGCTGCACCTGGACTGCGATGTGCTGCAGGCTGACGGCGGCA
CCCGCTGCGCCAGCATCACGGGCGCCTGGGTGGCGGCCGCCGATGCGGTGGCGCTGCTGATGCAGCGCGGCGACCTGGCG
GCCAACCCGATCCGCGACGCGGTGGCCGCCGTCTCGGTGGGCATGGTGGCCGGCCGCCCGGTGCTTGACCTGGACTACCA
GGAAGACTCCGCCTGCGATGCGGACGTGAACGTGGTCATGACGGGTGCGGGCGCGTTCGTGGAAGTGCAAGGCACGGGCG
AAGGCGCCACCTTCGCGCGCAGCGAACTCGATGCCATGCTGGGCCTGGCCGAGCAGGGCATCGCGCAATTGGTGCGGGCG
CAGCGCGAGGCGCTGGCATAA

Protein sequence :
MSSSTASAVARPSGRAVDQLRPFSLQRGYTRYAEGSVLVRAGNTHVLCTASVLDKVPPFLKGRGEGWVTAEYGMLPRATH
TRGDREAARGKQSGRTQEIQRLIGRSLRAVFDMKALGERTLHLDCDVLQADGGTRCASITGAWVAAADAVALLMQRGDLA
ANPIRDAVAAVSVGMVAGRPVLDLDYQEDSACDADVNVVMTGAGAFVEVQGTGEGATFARSELDAMLGLAEQGIAQLVRA
QREALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 7e-52 58