Gene Information

Name : fliP (Bpet2137)
Accession : YP_001630746.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2224971 - 2225759 bp
Length : 789 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :
ATGATGCTCCATCGCATGCACCATTTCCGCTCGTGCCGCCGCGTGCCGCTCGCCCTGGCCGCCGCCGCGCTGGCGGGGCT
GGCGCTGTTTCCGGCGGGCGTCGTGGCCCAGGCCACCCTGCCTGCCCTGACCGCCACGCCTGGCCCCGGCGGCGCGCAGA
CGTATTCGCTCAGCATGCAGACGCTGCTGCTGATGACTTCGCTGTCGTTCCTGCCGGCGGCACTGCTGATGATGACGGGC
TTCACGCGCATCATCATCGTGCTGGGGCTGCTGCGCAGCGCCCTGGGCACGGCCATGTCGCCGCCCAACCACGTGCTGAT
CGGGCTGGCCTTGTTTCTTACCTTCTACACCATGTCGCCGGTGTTCGACCGCATCTACAGCGAAGCCTACAAGCCGCTGT
CGGAAGGTTCGATTCCCTTCGAAACGGCCGTCGAGCGCGCCGCCGCGCCATTGCACACGTTCATGCTGCACCAGACGCGC
GAGAACGACCTGACCCTGTTCGCCAACCTGGCGAACCAGCCGGCCCTGGAAGATCCGTCGCAGGTGCCCATGAAGATCCT
GGTGCCCGCCTTCATCACCAGTGAACTGAAAACGGCTTTTCAGATCGGCTTCACCATCTTCATTCCTTTCCTGATCATCG
ATCTGGTGGTGGCCAGCGTGTTGATGGCGCTGGGCATGATGATGGTTCCGCCGGTCACCGTGGCCCTGCCTTTCAAGCTG
ATGCTGTTCGTGCTGGCCGACGGCTGGAACCTGCTGCTGGGGTCGCTGGCCAGCAGTTTCTACCAATAA

Protein sequence :
MMLHRMHHFRSCRRVPLALAAAALAGLALFPAGVVAQATLPALTATPGPGGAQTYSLSMQTLLLMTSLSFLPAALLMMTG
FTRIIIVLGLLRSALGTAMSPPNHVLIGLALFLTFYTMSPVFDRIYSEAYKPLSEGSIPFETAVERAAAPLHTFMLHQTR
ENDLTLFANLANQPALEDPSQVPMKILVPAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVALPFKL
MLFVLADGWNLLLGSLASSFYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 6e-28 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 6e-28 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 6e-28 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 5e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001630746.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-68 73
fliP YP_001630746.1 flagellar biosynthesis protein FliP VFG2494 Protein 5e-65 69
fliP YP_001630746.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-55 60
fliP YP_001630746.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-53 59
fliP YP_001630746.1 flagellar biosynthesis protein FliP VFG0188 Protein 1e-29 41