Gene Information

Name : Bpet1596 (Bpet1596)
Accession : YP_001630204.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Virulence
Product : two-component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1647342 - 1648049 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence :
ATGTGGCGCTGCCTGATCGTCGAAGACGATGCCGACAACGCCCGTTATATCGCCAACGGGCTCAAAGAACTAGGCTACGA
CCCCGTCATCACCATGGACGGGCCGACTGCGCTGCAGCGGGCCACCACCGAGCACTGGGATGCCATCATTCTGGATCGCA
TGCTGCCCAACGACGTCGACGGACTGTCGATTTTGTGGTCGCTGCGCGCGCTGGGCCGCAAGACGCCGGTGCTGGTGCTC
AGCGCGCTGACCGCGCTGGACGAGCGCGTGCGCGGCCTGAAGGCGGGCGGCGACGACTACTTGACCAAGCCGTTTGCCTT
TCCCGAGCTTGCCGCGCGTGTCGAGGCGCTGATCCGGCGTTCATCGTCCGGTTACGAACGCCGCCAACTGACCGTGGCCG
ACCTGTCGCTGGACCTGGTCAGCGGCCAGGTCGCGCGGGGCGGCCGTGCCATTACGCTGCAGCCGCGCGAATACAAGCTG
CTGGCCTACATGATGAACAATGCCGGCCAGGTGCTGACGCGCACCATGCTGCTGGCCACAGTGTGGGGCTATCACTACGA
CCCGCAGACCAACGTGATCGACGTGCACATCAGCCGGCTGCGCCAGAAGATCGACGGCCCGGGCGAAGCGCCGCTGATCC
ACACCGTGCGCGGCGTGGGCTACCGCCTGTCGGCGCAGGCCGACGCGGGCGGGCAGGCGCGCCCGTGA

Protein sequence :
MWRCLIVEDDADNARYIANGLKELGYDPVITMDGPTALQRATTEHWDAIILDRMLPNDVDGLSILWSLRALGRKTPVLVL
SALTALDERVRGLKAGGDDYLTKPFAFPELAARVEALIRRSSSGYERRQLTVADLSLDLVSGQVARGGRAITLQPREYKL
LAYMMNNAGQVLTRTMLLATVWGYHYDPQTNVIDVHISRLRQKIDGPGEAPLIHTVRGVGYRLSAQADAGGQARP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-40 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bpet1596 YP_001630204.1 two-component transcriptional regulator BAC0125 Protein 5e-41 46
Bpet1596 YP_001630204.1 two-component transcriptional regulator BAC0111 Protein 7e-46 46
Bpet1596 YP_001630204.1 two-component transcriptional regulator BAC0308 Protein 7e-42 45
Bpet1596 YP_001630204.1 two-component transcriptional regulator BAC0347 Protein 5e-43 45
Bpet1596 YP_001630204.1 two-component transcriptional regulator BAC0197 Protein 1e-38 43
Bpet1596 YP_001630204.1 two-component transcriptional regulator BAC0083 Protein 5e-43 43
Bpet1596 YP_001630204.1 two-component transcriptional regulator BAC0638 Protein 7e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bpet1596 YP_001630204.1 two-component transcriptional regulator VFG1389 Protein 2e-37 43
Bpet1596 YP_001630204.1 two-component transcriptional regulator VFG0596 Protein 4e-40 42
Bpet1596 YP_001630204.1 two-component transcriptional regulator VFG1390 Protein 2e-37 42
Bpet1596 YP_001630204.1 two-component transcriptional regulator VFG1386 Protein 2e-37 42