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Name : serS (Bpet1587) Accession : YP_001630195.1 Strain : Bordetella petrii DSM 12804 Genome accession: NC_010170 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1639539 - 1640885 bp Length : 1347 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTAGATCCGATACTGCTGCGCAAAGACCTGCAAACGGTCGTAAGCCGCCTGAAAACCCGCGGCGTCGACTTCGACAC GCAACGATTCAACGAACTGGAAGCGCGCCGCAAGGCCGTCCAGACCGAAACCGAATCGCTGCAGGCGCGCCGCAACGCGC TGGCCAAGCAAATTGGCCAGCTCAAGGCCCAAGGGCAGGATGCCTCGGCGGTGCTGGCCGAATCGCAGGCCATACCGGCC CGCCTGAAGCAGCTCGAAGACGACCTGGCCGTCGTGCAGCAATCGCTGGGCGATCTGCTGATGGCCGTGCCCAACTTGCC GCACGAAAGCGTGCCGGCGGGCGCCTCGGCCGACGACAACGTCGAAGTGCGCCGCTGGCTGCCCGGCCCGCCGGCGGCCG ACGGCAATCCGCCGCCGTTGCCTTTCGAGCCCAAAGACCACGTGGCGCTGGGCGAGCCCCTGGGGCTCGACTTCGATACG GCCGCCAAGCTGTCGGGCGCGCGTTTCTCGTTCATGCGCGGCCCGGTGGCGCGCCTGCACCGCGCGCTGGCCCAGTTCAT GCTCGACCTGCAAACCGGCCAGCACGGCTACACCGAGTGCTACACGCCGTACATCGTCAACAGTTCCACGCTGTACGGCA CCGGCCAACTGCCCAAGTTCAAAGACGATATGTTCTTCGTCACCAAGGGCGGCGAAGACGACGACCCCAAGGTCGACGAA CGCGGCAACGCGCTGGCGCGCGAAGACCAATACCTGATCTCCACGTCTGAAATCACGCTGACCAGCGTGGCGCGCGACAG CATTATTCCCGCCGCCAATCTTCCGCTGCGCCTGACCGCGCACACGCCTTGCTTCCGGTCCGAGGCGGGCAGCGGCGGGC GCGACACGCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGGTGCAGATCGTCCATCCCGAAACGTCGTAC CAGGTGCTGGAAGACATGGTGGGCCATGCCGAGCACGTGTTGCAGCTGCTCGAATTGCCGTACCGCGTGGTGCTGCTGTG CACGGGCGACATGGGCTTCGGTTCGGCCAAGACCTACGATCTCGAAGTGTGGCTGCCGGCCCAGAACACCTGGCGCGAGA TCTCGTCAGTATCCAACTGCGAAACCTTCCAGGCGCGCCGCATGCAGGCGCGCTTCCGCGCCGCGCAGGGCAAGCCCGAC TACGTGCACACGCTCAACGGCTCGGGCCTGGCCGTGGGCCGCGCCCTGGTCGCCGTCCTCGAAAACCACCAGCAGGCCGA CGGCAGCATCGCCGTGCCCAAGGTGCTGCAGCCCTACATGGGCGGCCTGACCGTACTGCAACCCTGA Protein sequence : MLDPILLRKDLQTVVSRLKTRGVDFDTQRFNELEARRKAVQTETESLQARRNALAKQIGQLKAQGQDASAVLAESQAIPA RLKQLEDDLAVVQQSLGDLLMAVPNLPHESVPAGASADDNVEVRRWLPGPPAADGNPPPLPFEPKDHVALGEPLGLDFDT AAKLSGARFSFMRGPVARLHRALAQFMLDLQTGQHGYTECYTPYIVNSSTLYGTGQLPKFKDDMFFVTKGGEDDDPKVDE RGNALAREDQYLISTSEITLTSVARDSIIPAANLPLRLTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQIVHPETSY QVLEDMVGHAEHVLQLLELPYRVVLLCTGDMGFGSAKTYDLEVWLPAQNTWREISSVSNCETFQARRMQARFRAAQGKPD YVHTLNGSGLAVGRALVAVLENHQQADGSIAVPKVLQPYMGGLTVLQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-90 | 49 |
