Gene Information

Name : Bpet1376 (Bpet1376)
Accession : YP_001629981.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1436940 - 1438346 bp
Length : 1407 bp
Strand : +
Note : -

DNA sequence :
ATGACTTCACGTTCTCCTGCTCCAGCCATTCACAAACATCTGCGCCGGAGCCTGCTCGTTTTCGCCCTGACGGTGGCATG
CTCTGGCGCCGTCGCCCAGACGAGCGTCAACGAATACGGCCTGCAACATCGTGGCAGCGTGATTGGCGACGATGTGCTGT
ACAGCATCGGCGGCGGCCGGGCCGTATCGATGACGGGCGCGGCCAACATGCGCTCGATCGGTGTTGGCGTTGGCTGGAAC
AGTAACCTCATTTGCGGCGACATGAGCCTCACCACCACGCTGCAGAACCAGTTGAATGGCATCACCAACGGGTTCCAGAC
CATCATGTCGAACGTGATCCAGAACGCCACCAGCGCGGTGGCTTCTCTGCCCGCGCTGATCATCCAGCGCGCCGATCCTG
GTCTCTATAACCTGCTCACCAACGGTGTCCTGCAAGCCAGGCTCGATTTCGACCGCTCAAAACTCACCTGCCGGGCGATC
GCGAACAGGATGGCCGACACGGCTGGCGGCCAGCTCGGCTGGGATCAGCTCGCGGAAGGCATGGCGCTCAAGAAGGCCGT
CGCCAGTACCGACGCGGTTTCCGCGATCGAGGAGGCGGAGAGCAGCAAGGGCAATGAGGGAGTGCCATGGGTCGGAGGCG
ACAATGCCGGCGGTTCGGGCCAGGCGCCTATCCGGGTGGTCGCTGACGTGACGCGCGCCGGCTACAACCTCGTCAACGGC
CGCAGCGTCGATGACACCTCGTCCATCGATTCCGGCAGTTGCGGCGACCGGCTGACGTGCCAGACCTGGAGTTCTCCGCA
GGCTGCTGTCACCTGGGCCACTCGTGTCCTGGGCGAGCAGGAACAGCGCACCTGCGAAAGCTGCACCAAGACGCAGACCA
CGCCCGGCGTCGGGCTGACCCCGCTCATCCAGGAAGAATACGAGACCAAGCTGGAAAGCCTGCAGGAACTGATCTCGGGC
AGCCAGTCGATGAGCTTCGACAATTTGCAGAAAGCAAGCAGCACGTCCCTGCCGATCACACGCGGCGTGATCGAAGCGCT
TCGGGATGAGCCGGATCAGGACATCCTCGCAAGGCGTCTCGCTTCCGAGGTTGCGCTCGCCAGCGTGCTGGAAAAAGCCT
TGCTGCTTCAGCGCACGTTGCTGACCGGACGGATGGAGCCGAATGTGGCAGCGAACGAAATGGCTCAGGAGGCGGTCACT
CAGGAGAGCGACATTCTCGACCGCGAGATCAACAACCTCAAGACCGAGCTCGAACTGCGCCGTGAGTTGGCCAACAACTC
CCCAATGCAGATCATCCAGCGCCACAGCACCCGGGCCGCAGGTTCGCGCGGCGTCTACCAGGGCGATCCCATCCCCAATC
GCCTCGACGAGTTGCAGCGTTCGCAACCGGGAGGAAGCAATCCATGA

Protein sequence :
MTSRSPAPAIHKHLRRSLLVFALTVACSGAVAQTSVNEYGLQHRGSVIGDDVLYSIGGGRAVSMTGAANMRSIGVGVGWN
SNLICGDMSLTTTLQNQLNGITNGFQTIMSNVIQNATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRAI
ANRMADTAGGQLGWDQLAEGMALKKAVASTDAVSAIEEAESSKGNEGVPWVGGDNAGGSGQAPIRVVADVTRAGYNLVNG
RSVDDTSSIDSGSCGDRLTCQTWSSPQAAVTWATRVLGEQEQRTCESCTKTQTTPGVGLTPLIQEEYETKLESLQELISG
SQSMSFDNLQKASSTSLPITRGVIEALRDEPDQDILARRLASEVALASVLEKALLLQRTLLTGRMEPNVAANEMAQEAVT
QESDILDREINNLKTELELRRELANNSPMQIIQRHSTRAAGSRGVYQGDPIPNRLDELQRSQPGGSNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-172 77
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-160 77
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 1e-132 66
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-135 65
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 1e-134 64
pph90 CAI36131.1 hypothetical protein Not tested PPHGI-1 Protein 3e-142 63
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 5e-75 42
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 2e-75 41
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 2e-75 41