Gene Information

Name : Bpet1088 (Bpet1088)
Accession : YP_001629691.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1152131 - 1153678 bp
Length : 1548 bp
Strand : +
Note : -

DNA sequence :
ATGACGCTGTTCACGACCGACTACCTAGAGTACTACCTGACGCTCGTGTCCTGGATCGTCAACAACGGCATCTGGGCCGT
GCTGGTGTCCAGTGGAGTATTCGCGTTGCCATTCGTGGCAATCATCGTGCAGGAATGGCTGAAGGCCCGCTCCGAAGGCG
CTGACGAAGGCAACAAGGGTGTGCTCTCGGCTGCGCGCATCGAGAACCGGGTCTTCGTCGCCATCGTCGTGGTGATGTTC
GCCGGCATCCCGTTCATCGACGTGGACCTCAACACCATTCAGTACGACAGTTCGCGCTCGGCGCAATGCCAAGTCAGCGT
GCCGCAGCCTACGGAGACCGGCTGGTCGCAGTCCTTCAGCACCATCAACAACCAGTCGGCGAAGGTGCCGGTCTGGTGGG
CTTTCATGCACGCGCTCTCGCGCGCCGTCACGAGCGCCTCGGTGGCGGCGATCCCGTGCGGCACGGACCTGCGGCAGATG
CGCATGGAGATCGACGCCACGCGCATCGATGATCCTGTACTGGCTCAGGAAGTTGCGGATTTCTCGCGGGATTGCTATGG
GGCTGCACGGGCGAAATTATTCATGCAGCGCCCTCAGCTCGATGAGCAGCAAATACACGACGTGACCTGGATCGGTTCGC
GCTTCTTCACGGACACGAACGGCTATTACGACACGTACCGTTCCAGCACGCCGCGCGATGACTGGCCCTACGACAGCAAC
CGCGATGCAGGGCTGGCGCAGGTGGCAAGCGGCGGCGGCTACCCGACCTGCAGGCAATGGTGGGCCGACGGTAGCAATGG
CCTGCGGGCGCGGCTTCTGGGCCAGGTGGACCCGAGCCTGCTCAATCGCCTGGCGGGCTGGGCTGGCTTCCTGAGCCGGG
CCGAGGTGGACGATTCGGTGATCCGCGCGATCGCGTCACCGCGGCAGCAGAAGCTCAATCAGGGGTCGGTCTATACCGAT
TACGGCGGCCAGATCGAAATGACCGACCCGAACATTGTCACGCGAGCTGCGAGCGATGTTGGCCTGGCAATCGGATCACT
GGGCTACTTCCCCGCCATGGACGCTGTGCGCCAGGCTCTACCGATGGTGTTGTCGTTGCTGAAGATGGCCCTGGTCATTT
GCATCCCGCTGGTGCTCGTGGTCGGAACCTACGGCCTCAAGACGGTGATGACTGCATCGGTGGTCCAGTTCGCGCTGTTC
TTCGTGGACTTCTGGTTCCAGTTGGCTCGCTGGATCGATAGCACGATCCTGGACGCACTCTACGGCTGGGGATGGGGGTG
GAACCGGCCCCACTCGAACTTCGATCCCGTCATGGGGCTCAACAATGCCTTCGGCGATATGTTGCTGAACTTCGTGATGG
CAACGATGTTCATCGTACTGCCCCTGTTCTGGGTGACTGCCTTGGGATGGGCCGGCTACGCTGTCGGCAATCTGTTGCAG
GGCCTCACGATGGGGACCGCTGGTGCCAGGGCCGCAGGCGGTAAGGCCGGCGACCTTGCGTTCGGCAATGCCATGAAGTG
GGCAACGACACCCGGGAAGAAGAAATAG

Protein sequence :
MTLFTTDYLEYYLTLVSWIVNNGIWAVLVSSGVFALPFVAIIVQEWLKARSEGADEGNKGVLSAARIENRVFVAIVVVMF
AGIPFIDVDLNTIQYDSSRSAQCQVSVPQPTETGWSQSFSTINNQSAKVPVWWAFMHALSRAVTSASVAAIPCGTDLRQM
RMEIDATRIDDPVLAQEVADFSRDCYGAARAKLFMQRPQLDEQQIHDVTWIGSRFFTDTNGYYDTYRSSTPRDDWPYDSN
RDAGLAQVASGGGYPTCRQWWADGSNGLRARLLGQVDPSLLNRLAGWAGFLSRAEVDDSVIRAIASPRQQKLNQGSVYTD
YGGQIEMTDPNIVTRAASDVGLAIGSLGYFPAMDAVRQALPMVLSLLKMALVICIPLVLVVGTYGLKTVMTASVVQFALF
FVDFWFQLARWIDSTILDALYGWGWGWNRPHSNFDPVMGLNNAFGDMLLNFVMATMFIVLPLFWVTALGWAGYAVGNLLQ
GLTMGTAGARAAGGKAGDLAFGNAMKWATTPGKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C40 AAN62133.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 94
ORF SG48 AAN62270.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 80
pph92 CAI36133.1 hypothetical protein Not tested PPHGI-1 Protein 5e-155 63
unnamed ABR13354.1 hypothetical protein Not tested PAGI-5 Protein 7e-148 61
RL014 AAP84141.1 conserved hypothetical protein Not tested PAPI-1 Protein 8e-147 60
EXA17 ABD94626.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-147 60
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 2e-89 45
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 1e-94 44
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 1e-94 44