Gene Information

Name : Bpet1081 (Bpet1081)
Accession : YP_001629684.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 1144468 - 1147356 bp
Length : 2889 bp
Strand : +
Note : -

DNA sequence :
ATGCGGTGGAAACTTCCCTGGGCGAAGCCGGCCGCACCGACGCTGGCCGCATCCGGCGGTGGTGATGACGAGCAGCCGGA
CGGCTGGCAGCGCCACGTCGAGGCCTTGCACCAGGCCGGCATCCCCGAACCCGGCGCCGCGGTCCAGGACCGCAGGCCGG
CGACCGTGGCCGACGAGCAGGTGCTCTACGACGTCGCCCCGTCCTTCGTGGAACTGCTGCCCTGGGTGGAGTTCCTGCCC
GAGTCGAAGACCATGCTGCTGGAGGACGGTCAGTCCGTGGCCGCCTTCTACGAACTGGTGCCGCTGGGCACCGAAGGCCG
GGAACCCGGCTGGCTTGCGCATGCCCGCGATGCCTTGGAGAACGCGCTCCAGGACTCCTTCGATGAGCTGGACGAGAACC
CGTGGGTGCTCCAACTCTACGCCCAGGACGAACCGAGCTTCGACCAGTACATGCAGACGCTGCGCGACTATGTGCAGCCA
CGTGCGCGCGGCACGGCATTCACCGAGTTCTACCTGCGCTTCTTCGGCCACCACCTGCGCGCGGTGGCCAAGCCCGGCGG
CCTGTTCGAGGACACGGTGGTCACGCGGCTGCGCTGGCGCGGCCAGACGCGGCGCGTGCGCATGGTGGTGTATCGCCGCG
CGAGCGGACAGGGACAGGCAAATCGCCGCGGGCAGACGCCCGAGCAGATGCTGGGCATCGTCTGCGACCGCCTGTGCGGC
GGCCTGGCGAACGCCGGCATCCAGGCACGGCGTATGGTCGCGGCCGACGTCCACGACTGGCTCCTGCGGTGGTTCAACCC
GCATCCCACGCTGCTCGGGCCTGACGCTGAGGATCGCGAGCGCTTTTACTCGTTGGCGCACTACCCCGAAGAGACCGAGG
CCGGCGAGATCGAGCTGGCGAGCGGGCGGGATTTCAGCCAGCGGCTGTTCTTCGGTCAGCCACGCTCGGACGTGGCGCAA
GGGGCCTGGTACTTCGATGGCATGCCGCATCGCGTGCTGATCACCGACCGGCTGCGCATGCCGCCCGGCACCGGGCACCT
GACCGGCGAGACCCGCAAGGGCGATGCGATCAACACGCTGTTCGACCAGATGCCCGAAGACACGGTGATGTGCCTGACGA
TGGTCGCCACGCCACAGGATGTCCTCGAATCGGACCTCAACCACCTGGCGAAAAAAGCCGTGGGCGAGACGCTGGCGTCG
GAGCAGACGCTCAAGGATGTGCATGAGGCGCGCGCGCTGATCGGCAGCGCGCACAAGCTCTACCGGGGCACGTTGGCGTT
CTACCTGCGCGGTCGCGACGAGGCGGAGCTGGACCGGCGCGGGCTGGATCTCGCGAACGTGATGCTCAACGCCGGCCTGC
AGCCGGTGCGCGAGGACGACGAGGTAGCGCCGCTCAACAGCTATCTGCGCTGGCTGCCGTGCTGCTACAACCCCGGCAAG
GATCGGCGCCGCTGGTACACGCAACTGATGTTCGCGCAGCACGCCGCCAATCTCTCGCCGGTATGGGGACGCGCCCAGGG
CACGGGCCACCCCGGCATCACGATGTTCAATCGCGGAGGTGGCCCGATTACGTTTGACCCCTTGAACAGGTTGGATCGGC
AGATGAATGCCCATCTGTTCCTGTTCGGCCCCACCGGCTCGGGCAAGTCCGCCACGCTCAACAACCTGCTGAACCAGGTC
ACGGCCATCTACCGGCCGCGGCTTTTCATCGTGGAGGCTGGAAATTCGTTCGGGCTTTTCAGCGACTTCGCCAGGCGCCT
GGGGCTGACCGTGAACCGGGTCAAGCTGGCCCCGGGCTCGGGCATCAGTCTGGCGCCGTTCGCCGACGCACGACGGCTGA
TCGAAACGCCCAGCGACGTGCAGACGCTCGATGCCGATGCACTGGACGAAGACCTGCCACCGGATGCCTCGGCCATGGAG
GCGGACGAGCAGCGCGACGTGCTGGGCGAGCTGGAGATCACGGCACGGCTGATGATCACGGGCGGCGAGGACAAGGAAGA
AGCGCGGATGACGCGGGCCGACCGCTCGCTGATCCGCCAGTGCATCCTCGATGCGGCTGAACACTGCGTGGCCGAGAAGC
GCACCGTGCTCACGCGCGATGTGCGCAATGCGCTGCGCACCCGCGGCCAAGACCCGACGTTGCCCGAGATGCGGCGCGTG
CGGCTGCTTGAGATGGCGGATGCGATGGACATGTTCTGCCAAGGCACGGACGGCGAGATGTTCGACCGCGATGGCACGCC
GTGGCCCGAAGCCGACATCACGCTGGTGGATCTCGCGACCTATGCCCGCGAGGGCTACAACGCGCAGCTCTCCATCGCTT
ACATCTCGCTGATCAGCACCGTCAACAACATCGCTGAGCGCGACCAGTACCTGGGTCGTCCGATCATCAACGTGACCGAC
GAAGGCCACATCATCACCAAGAACCCGTTGCTCGCACCCTACGTGGTCAAAATCACAAAAATGTGGCGCAAGCTAGGGGC
CTGGTACTGGCTAGCTACACAAAATATCGACGATCTGCCGCGTGCCGCGGAGCCCATGCTCAACATGATTGAGTGGTGGT
TGTGCCTGTCGATGCCACCGGACGAAGTGGAAAAGATCGCTCGGTTCCGCGAACTCTCGCCGGCGCAGAAGGCGCTGATG
CTGTCGGCACGCAAAGAAGCAGGCAAGTTCACCGAAGGCGTGATCCTGTCGAAGTCGATGGAAGTGCTGTTCCGCGCCGT
GCCGCCGAGCCTTTACCTCGCGCTTGCGCAGACCGAACCCGAAGAGAAGGCCGAGCGCTACCAGCTCATGCAGCAATACG
GCTGCACCGAACTGGAAGCGGCCTTCAAGGTGGCCGAGAAGATCGACCAGGCACGCGGCATCGAGTCGCCCGCCTTGGAA
CTGTCGTAA

Protein sequence :
MRWKLPWAKPAAPTLAASGGGDDEQPDGWQRHVEALHQAGIPEPGAAVQDRRPATVADEQVLYDVAPSFVELLPWVEFLP
ESKTMLLEDGQSVAAFYELVPLGTEGREPGWLAHARDALENALQDSFDELDENPWVLQLYAQDEPSFDQYMQTLRDYVQP
RARGTAFTEFYLRFFGHHLRAVAKPGGLFEDTVVTRLRWRGQTRRVRMVVYRRASGQGQANRRGQTPEQMLGIVCDRLCG
GLANAGIQARRMVAADVHDWLLRWFNPHPTLLGPDAEDRERFYSLAHYPEETEAGEIELASGRDFSQRLFFGQPRSDVAQ
GAWYFDGMPHRVLITDRLRMPPGTGHLTGETRKGDAINTLFDQMPEDTVMCLTMVATPQDVLESDLNHLAKKAVGETLAS
EQTLKDVHEARALIGSAHKLYRGTLAFYLRGRDEAELDRRGLDLANVMLNAGLQPVREDDEVAPLNSYLRWLPCCYNPGK
DRRRWYTQLMFAQHAANLSPVWGRAQGTGHPGITMFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNLLNQV
TAIYRPRLFIVEAGNSFGLFSDFARRLGLTVNRVKLAPGSGISLAPFADARRLIETPSDVQTLDADALDEDLPPDASAME
ADEQRDVLGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAEHCVAEKRTVLTRDVRNALRTRGQDPTLPEMRRV
RLLEMADAMDMFCQGTDGEMFDRDGTPWPEADITLVDLATYAREGYNAQLSIAYISLISTVNNIAERDQYLGRPIINVTD
EGHIITKNPLLAPYVVKITKMWRKLGAWYWLATQNIDDLPRAAEPMLNMIEWWLCLSMPPDEVEKIARFRELSPAQKALM
LSARKEAGKFTEGVILSKSMEVLFRAVPPSLYLALAQTEPEEKAERYQLMQQYGCTELEAAFKVAEKIDQARGIESPALE
LS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 97
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 79
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 66
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 63
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 63
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 63
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 53
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 53
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 53
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 52
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 52
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 49