Gene Information

Name : Bpet1078 (Bpet1078)
Accession : YP_001629681.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1141713 - 1142630 bp
Length : 918 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCATCCTGTACTCGCGCTGCTGGGGCTGCTGGCCGTGGCCGCGGCACCCGTCGCCCATGCCGTGGAGATCCTGCG
CTGGGAACGCATGCCACTGGCGGTGCCTTTGAGGGTCGGCCAGGAGCGCATCGTGTTCATCGACCGCAATGTGCGCGTCG
GCGTGCCCGCAGGCGTGGGTGAGCGTCTGCGCGTGCAGAGCGCGGGCGGCGCGGTGTATCTGCGCGCCAGCGAGCCGATC
GAGCCCACGCGACTGCAATTGCAGGACGCCGACACGGGCGCACTGATCCTACTGGACATCGCCGCCGAGCCGGCCAAGGA
CGGCGAGCCTGCGCTGGAGCCCGTGCGCATTGTCGAGGGTGATGCCACTCCCGCGCGCTACGGCGAGCAACGGGCCGATG
GCGACGAAGCCGTGACACCCACCAACGGCCAGGCGAACGTGAGGGGAAGCCGGCGCGAAATCCCCATCCCCGTGGTGCTG
ACGCGCTTCGCCGCGCAGAACCTCTACGCACCGCTGCGCACCGTGGAATCCCTGCCGGGCGTCATGCGGGTCAACCTGCG
CAGTGGCCTGGACCTCCGCACGCTGATGCCGACGCTGCCGGTGAGTGCTACCGCGCTCGCCTCGTGGCGCCTGGAAGACC
AGTGGGTGACGGCCGTGCGCCTCACCAACACCAGCGCAGGCTGGGTCACGCTTGATCCGCGTGTGCTGCAAGGCGATTTC
CTCGCCGCGACCTTCCAGCACGAGGCGCTGGGTCCGCGCGGAACGCCAGAGGACACGACCGTCCTGTACCTGGTGACGCG
CGGGCGCGGCCTGGCGCAGTCGCTGCTGCCGGCCATTCATCGCTTCGATCCAGCCGTGCATCTGCCGCAGCCAGAAGCCG
AAGCCACCGAAAGCAAGGAGGCCGACCATGCGCAGTAA

Protein sequence :
MKHPVLALLGLLAVAAAPVAHAVEILRWERMPLAVPLRVGQERIVFIDRNVRVGVPAGVGERLRVQSAGGAVYLRASEPI
EPTRLQLQDADTGALILLDIAAEPAKDGEPALEPVRIVEGDATPARYGEQRADGDEAVTPTNGQANVRGSRREIPIPVVL
TRFAAQNLYAPLRTVESLPGVMRVNLRSGLDLRTLMPTLPVSATALASWRLEDQWVTAVRLTNTSAGWVTLDPRVLQGDF
LAATFQHEALGPRGTPEDTTVLYLVTRGRGLAQSLLPAIHRFDPAVHLPQPEAEATESKEADHAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 7e-112 86
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-73 66
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 1e-71 59
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-71 59
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 5e-72 59
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 3e-75 59
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 6e-53 51
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 6e-53 51
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 1e-53 50
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 1e-53 50
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 3e-53 49
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 1e-52 49
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 6e-51 46