Gene Information

Name : ssb1 (Bpet1036)
Accession : YP_001629639.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1103826 - 1104278 bp
Length : 453 bp
Strand : +
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence :
ATGAGCACGCATTTTTCGGGCGAAGGCAACATCGGCTCGCCCCCCGAGTACCGGGAGTTCCCCAACGGCAACGACGAACC
GCGGCGCTTGTTGCGGCTGAACGTGTATTTCGACAACCCCGTTCCCACCAAGGGCGGCGACTATGAGGATCGCGGCGGCT
TCTGGGCGCCGGTGGAAATCTGGCACCGCGACGCCGCGCACTGGAAGGACCTCTACCAGAAGGGCATGCGCGTGCTGGTC
GTCGGCCGCATGGAGCGCGAACCCTGGACCGACAACGAGGATCAGCCACGTGAGACTTGGCAGATCAACGCGCGCAGCGT
CGGCATCCTGCCGTTCCGCATCGAGTCCGTCGTCCTGAGCCCCAAATCGCAGGAGACCGCACAGGACGCGCAGCCCAAGC
CCCAGGCCGCCCAGGAACCGGCTGCGCCGAAGGAGCCCAAGCGCAGGAAGTGA

Protein sequence :
MSTHFSGEGNIGSPPEYREFPNGNDEPRRLLRLNVYFDNPVPTKGGDYEDRGGFWAPVEIWHRDAAHWKDLYQKGMRVLV
VGRMEREPWTDNEDQPRETWQINARSVGILPFRIESVVLSPKSQETAQDAQPKPQAAQEPAAPKEPKRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 3e-52 86
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 6e-43 74
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 3e-29 56
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 4e-24 49
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 5e-24 48