Gene Information

Name : Bpet1018 (Bpet1018)
Accession : YP_001629621.1
Strain : Bordetella petrii DSM 12804
Genome accession: NC_010170
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1090293 - 1091054 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence :
ATGCCACACGTCCAGCGAGTCTGGCAGGAGAACTATCGCGTCTACGGCGCCGACAAGGTCTGGCGGCAGTTGAACCGCGA
AGGCGTGAGGGTGGCCCGTTGTACGGTCGAACGGCTGATGCGCGCTCAGGGCCTGCAAGGCGTGCGGCGCGGCAAGCGGC
TGCGAACGACCATCGCTGATGATGCGGCCAGCCGTCCAGTGGATCGGGTCAACCGGCAGTTCCGGGCCGATCGCCCCAAT
CAGCTCTGGGTCTCGGACTTCACCTACGTCTCGACCTGGCAGGGTTGGCTGTACGTGGCCTTCGTCATCGACGTCTACGC
CCGGCGCATCGTCGGCTGGCGAGTGAGCAAGTCGATGACGACGGACTTCGTGCTTGATGCGCTGGAGCAGGCTCTATATG
CCCGTCAGCCCGGCAACGATGGTTCTCTAACCCATCACTCCGACAGAGGGTCGCAATACGTCAGTATCCGCTATAGCGAG
CGCCTGGCCGAAGCGGGCATCGAGCCGTCCGTGGGTAGCCGTGGTGACAGTTACGACAACGCCTTGGCCGAGACCATCAA
CGGCTTGTACAAGGCTGAACTAATTCACCGTCGCGCACCCTGGAAAACCAGGGAATCTGTCGAGCTGGCAACCTTGGAAT
GGGTTGCCTGGTTCAACCATCAACGCCTGCACTCATCCATCGGCTATATCCCGCCGGCTGAGGCTGAGGCAAACTACTAC
AACCAACTCGGCACATCCGCCGGTGAGGCCGTTTTACTTTAA

Protein sequence :
MPHVQRVWQENYRVYGADKVWRQLNREGVRVARCTVERLMRAQGLQGVRRGKRLRTTIADDAASRPVDRVNRQFRADRPN
QLWVSDFTYVSTWQGWLYVAFVIDVYARRIVGWRVSKSMTTDFVLDALEQALYARQPGNDGSLTHHSDRGSQYVSIRYSE
RLAEAGIEPSVGSRGDSYDNALAETINGLYKAELIHRRAPWKTRESVELATLEWVAWFNHQRLHSSIGYIPPAEAEANYY
NQLGTSAGEAVLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1198 NP_286733.1 transposase Not tested TAI Protein 2e-69 66
Z1638 NP_287141.1 transposase Not tested TAI Protein 2e-69 66
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 7e-70 66
Z1221 NP_286756.1 transposase Not tested TAI Protein 7e-70 66
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 2e-61 65
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 4e-61 65
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 8e-70 65
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 5e-70 65
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-69 65
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 7e-70 65
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-70 65
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-70 65
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 4e-70 65
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-67 65
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 4e-57 64
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-68 64
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 8e-69 64
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-68 64
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-68 64
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-70 64
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-67 63
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 9e-51 52
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 5e-34 49
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 2e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bpet1018 YP_001629621.1 integrase catalytic subunit VFG1602 Protein 2e-67 63