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Name : RSal33209_3225 (RSal33209_3225) Accession : YP_001626356.1 Strain : Renibacterium salmoninarum ATCC 33209 Genome accession: NC_010168 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2868711 - 2870051 bp Length : 1341 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGCTGGGCCCTGAAATGACGACTGACTCGATAGCCCGCCCAAGCTATAGGCTTGTGCTCATGATCGACGTCAAAGACTT GAACGAGAACCCGGAAAAGTACCGTGCTAGCCAACGTGCGCGCGGTGACAAGGAATCTATGGTGGATGCGATCATCTCCG CCGACCAATCTCGTAAAAGCGCTATCACCTCGTTCGAAGCACTGCGGGCCGAGCAAAATGCCTTTGGCAAGAGAGTGGCC GCGGCCAAAGGCGAGGAAAAACAGGAATTGCTGGCCCAGGTTAAGGATCTCGCCGCGCGAGTGAAAGCGTCCTCGGCGGC GGCGGATCTGGCTCAGGGCGAACAAGACGAGTTGGTGCGGGCGTTTCCCAACCTGATTATCGACGGCGTGCCCACCGGTG ACGAAGACGACTTTGCGCTGGTTAAGACAGTCGGAGAGCCTCGCGATTTTGCCGCGGCTGGCTTTGCGCCGCGCGACCAT CTAGAAATCGGCGAGCTTATTGGTGGCATCGATATGGAGCGCGGAGCAAAAGTTTCAGGCGCACGCTTTAGCTTCTTGAA GGGCCCGGTTGCTCGGCTGGAGATCGCGCTGATGAATATGGCGCTAGATCAGGCGACTAGCTACGGCTTCATTCCGATGA TTACCCCGACTTTGGTTCGACCGGAAACAATGGCTGGCACCGGATTTGATGTCAAGCATGATGATGAAATTTACCGGCTG GAAAAGGACGACCTTTACCTTGTTGGAACCTCCGAAGTTGCGCTTGCGGGTTATCACAGCGACGAGATTATTGATCTGAG CAAAGGCCCAATTCGCTACGCCGGTTGGTCCTCCTGCTACCGTCGCGAGGCTGGATCGGCTGGAAAAGACACCCGCGGGA TTATTAGGGTGCACCAATTCAACAAACTTGAGATGTTCGCTTACATCCCCTTGGAAGAAGCTGAAGCGGAGCACGCGCGA ATGCTTGCTTGGGAAGAGGAAATGCTGGGCAAACTGGAGGTGCCGTATCGGGTAATTGACACTGCTGCTGGCGATTTGGG TTTGTCTGCAGCGCGCAAGTTCGACTGTGAGGCGTGGGTGCCCAGCCAAGGTCAGTACCGGGAGCTCACCTCAACATCCA ACTGCACTGGGTTCCAAGCGCGCAGGCTCAATATTCGCGAGCGTATTCCCGGCGAAGATGCCAAAGGCACCCGAGCAGTG GCTACGCTCAACGGTACTTTGGCTACGACGCGCTGGATTATGGCGATTCTGGAGAACCACCAGAACGCTGACGGTACCGT GACCGTCCCGGAAAAGCTTCGTCCTTACCTGGGCGGACTGGCGACCATCGAGCTGGTCTAA Protein sequence : MLGPEMTTDSIARPSYRLVLMIDVKDLNENPEKYRASQRARGDKESMVDAIISADQSRKSAITSFEALRAEQNAFGKRVA AAKGEEKQELLAQVKDLAARVKASSAAADLAQGEQDELVRAFPNLIIDGVPTGDEDDFALVKTVGEPRDFAAAGFAPRDH LEIGELIGGIDMERGAKVSGARFSFLKGPVARLEIALMNMALDQATSYGFIPMITPTLVRPETMAGTGFDVKHDDEIYRL EKDDLYLVGTSEVALAGYHSDEIIDLSKGPIRYAGWSSCYRREAGSAGKDTRGIIRVHQFNKLEMFAYIPLEEAEAEHAR MLAWEEEMLGKLEVPYRVIDTAAGDLGLSAARKFDCEAWVPSQGQYRELTSTSNCTGFQARRLNIRERIPGEDAKGTRAV ATLNGTLATTRWIMAILENHQNADGTVTVPEKLRPYLGGLATIELV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-62 | 42 |
