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Name : RSal33209_3195 (RSal33209_3195) Accession : YP_001626326.1 Strain : Renibacterium salmoninarum ATCC 33209 Genome accession: NC_010168 Putative virulence/resistance : Virulence Product : hemolysin Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2840700 - 2843192 bp Length : 2493 bp Strand : - Note : negative regulator of genetic competence DNA sequence : ATGTTCGAAAGATTTACAGACAGAGCCCGTCGGGTGGTCGTGTTGGCCCAAGAAGAGGCCCGCATGCTCAACCACAACTA CATCGGTACCGAGCACATCTTGCTCGGCCTCATTCACGAGGGCGAGGGCATTGCCGCAAAGGCACTGGAATCGCTGAGTA TTTCCCTCGATGCGGTACGTGAACAAGTGCAGGAGATCATCGGCCAGGGGCAGCAGGCTCCTAGTGGACACATCCCCTTT ACTCCGCGCGCCAAGAAGGTACTCGAACTCTCGCTGCGTGAGGCTTTGCAGCTCGGCCATAATTACATCGGTACCGAGCA CATTTTGCTCGGATTGATCCGCGAGGGCGAAGGCGTTGCTGCCCAGGTGCTGGTTAAGCTCGGCGCGGATCTTAGCCGCG TTCGTCAGCAGGTAATTCAGCTGCTGTCCGGGTACCAAGGCAAAGAAACCGCGAGTGCAGGAGTTGGCCAAGGCCAGCAA GAGGGCACTCCGGCTGGTTCAGTGGTACTTGACCAGTTCGGTCGTAACCTGACGCAGGACGCTCGCGATAACAAACTTGA TCCGGTCATTGGTCGCGAGCATGAGATGGAACGCGTCATGCAGATCCTCTCTCGCCGCACCAAAAATAACCCGGTGCTTA TTGGTGAGCCAGGCGTTGGTAAGACTGCCGTCGTCGAAGGTTTGGCTCAGGCAATAGCACGGGGTGACGTACCGGACACC ATCAAAGATAAGCAGCTTTATACCCTTGATCTAGGATCGTTGGTCGCTGGCTCGCGATACCGCGGAGATTTTGAAGAACG CCTGAAGAAGGTGCTCAAAGAAATCCAGACTCGCGGCGACATCATCTTGTTCATTGACGAGATTCACACCCTCGTCGGTG CCGGTGCCGCAGAAGGCGCAATCGATGCTGCTTCGATCCTCAAGCCCAAATTGGCTCGTGGTGAATTGCAGACGATCGGT GCCACGACTCTGGATGAGTACCGTAAGCACATTGAAAAGGATGCGGCTCTTGAACGGCGATTCCAGCCCATCCAAGTCAA GGAGCCCTCGGTTTCGCACGCCATTGAGATCCTCAAGGGCTTGCGCGACCGCTACGAAGCCCATCACCGGGTTTCGATTA CCGATGGTGCACTGACCTCGGCTGCGACGCTGGCCGAGCGGTATATTTCTGATCGCTTCTTGCCGGACAAGGCCATCGAT CTGATCGATGAGGCCGGCGCCCGGTTGCGCATTCGTCGGATGACCGCACCGCCGGAGCTCAAAGAGATGGACGGCGAGAT CGCTTCGGTTAAGGCGCAGAAAGAAGCCGCAATCGACGCGCAGGACTTCGAAGGTGCTGCTGCTTTGCGCGACACCGAGC AGAAGTTGATCACCGAACGTGCAGATAAAGATCGGGCTTGGCGCACTGGCGGCATAGACAGCGTTACCGAAGTCGATGAA GAGCTCATCGCCGAGGTACTGGCTAATTCAACTGGTATTCCAGTGTTCAAGCTGACCGAGGAAGAATCCGGTCGCTTGCT CAAAATGGAAGACGAGCTGCATAAGCGCGTTGTTGGCCAAGATGAGGCCATCAAGTCGCTTTCGCAAGCTATTCGACGCA CTCGCGCTGGGTTGAAAGACCCGAAGCGTCCTGGCGGCTCATTCATCTTCGCCGGGCCAACCGGTGTTGGTAAGACTGAG CTAGCAAAGGCACTTGCCGAGTTCTTGTTCGGGGAAGAAGACGCGTTGATTACGTTGGATATGTCTGAGTACTCAGAGAA GCACACCGTGTCCAGACTCTTCGGTGCGCCTCCTGGATATGTTGGTTATGAAGAGGGCGGCCAGCTCACCGAAAAGGTTC GCCGCAGGCCATTCTCGGTAGTGCTTTTCGACGAAGTTGAAAAGGCGCACGCTGATCTGTTCAACTCGCTTTTGCAGATC CTCGAAGACGGACGCTTGACCGATAGCCAAGGTCGGGTTGTCGACTTCAAGAACACCGTGATCATCATGACGACCAACTT GGGCACCAGAGATATCTCTAAGAGCGTTGCCACCGGGTTCCAATCCGGCACGGACACGCAGACCGGCTATAACCGGATGC GTGCTCGGGTTACTGAGGAACTCAAGCAGCACTTCCGTCCCGAGTTCCTGAACCGTGTTGACGACGTCGTGGTCTTCCCG CAGCTCACGCAGGACGAGATCGTGGAGATCGTCGATATGTTCGTGGCTCGCTTGGAGCTGCGGCTCAAAGAGAAGGACAT GGGCATTGAGCTGACGGCGGCTGCCAAGGCTTTGTTGGCTACCCGAGGTTACGATCCGGCAATGGGTGCGCGGCCCCTGC GCCGTACCATTCAGCGCGAGATCGAGGACCAGTTGTCCGAAAAGATCCTGTTTGGCGAGCTTAAAGCTGGCGAGATTGTG GTCGTGGATGTTGAAGGTGATGGTGACGAGGCGAAGTTCACTTTTGCCGGAACCGCCAAGCCTCGAGTGCCTGAAATTGC ACCCGTAGCCTAG Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGIAAKALESLSISLDAVREQVQEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLLSGYQGKETASAGVGQGQQ EGTPAGSVVLDQFGRNLTQDARDNKLDPVIGREHEMERVMQILSRRTKNNPVLIGEPGVGKTAVVEGLAQAIARGDVPDT IKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIQTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQTIG ATTLDEYRKHIEKDAALERRFQPIQVKEPSVSHAIEILKGLRDRYEAHHRVSITDGALTSAATLAERYISDRFLPDKAID LIDEAGARLRIRRMTAPPELKEMDGEIASVKAQKEAAIDAQDFEGAAALRDTEQKLITERADKDRAWRTGGIDSVTEVDE ELIAEVLANSTGIPVFKLTEEESGRLLKMEDELHKRVVGQDEAIKSLSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGKTE LAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHADLFNSLLQI LEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKSVATGFQSGTDTQTGYNRMRARVTEELKQHFRPEFLNRVDDVVVFP QLTQDEIVEIVDMFVARLELRLKEKDMGIELTAAAKALLATRGYDPAMGARPLRRTIQREIEDQLSEKILFGELKAGEIV VVDVEGDGDEAKFTFAGTAKPRVPEIAPVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 74 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-98 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RSal33209_3195 | YP_001626326.1 | hemolysin | VFG0079 | Protein | 0.0 | 61 |
| RSal33209_3195 | YP_001626326.1 | hemolysin | VFG0080 | Protein | 9e-150 | 50 |
