Gene Information

Name : RSal33209_2763 (RSal33209_2763)
Accession : YP_001625902.1
Strain : Renibacterium salmoninarum ATCC 33209
Genome accession: NC_010168
Putative virulence/resistance : Unknown
Product : IS994
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2471266 - 2471601 bp
Length : 336 bp
Strand : -
Note : OrfA

DNA sequence :
ATGGCAGGGAAAACTACGACACGGTATCCGCAGGAGTTGAAGGATCGTACGGTGCGCATGGTGGCGGAGATGGAGGGTGC
ATCTTCGGAGTGGGCGGCGATGCAAAAAGTTGCCCAGCTTTTGGGTGTGGGTGTGCCGGAAACGGTGCGTAAATGGGTCC
GGCAAGCCGAGATCGATGTTGGTACTAGAACTGGAACAACGAGCACGGAATCGGCCGAGCTGAAACGGGCGAACGCGATC
CTTCGGAGTGCTTCAGCTTTTTTCGCGGTCGAACTCGACCGCCACAACACTGATCGTGAAATACATCAAGGACCATGCCG
GTCACCGCGAGAATAA

Protein sequence :
MAGKTTTRYPQELKDRTVRMVAEMEGASSEWAAMQKVAQLLGVGVPETVRKWVRQAEIDVGTRTGTTSTESAELKRANAI
LRSASAFFAVELDRHNTDREIHQGPCRSPRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 3e-10 45
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 3e-10 45
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 3e-10 45
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 3e-10 45
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 1e-07 43
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 7e-10 43
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 7e-10 43
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 7e-10 43
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 7e-10 43
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 1e-09 43
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-06 43
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 2e-06 43
unnamed AAF09023.1 unknown Not tested SHI-O Protein 3e-08 42
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 3e-08 42
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 2e-08 42
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-08 41
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 9e-08 41
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 9e-08 41
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 3e-08 41
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 3e-08 41
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 3e-08 41
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 6e-08 41
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 1e-06 41
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 6e-08 41
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSal33209_2763 YP_001625902.1 IS994 VFG1603 Protein 4e-08 43
RSal33209_2763 YP_001625902.1 IS994 VFG0606 Protein 6e-09 42
RSal33209_2763 YP_001625902.1 IS994 VFG0643 Protein 3e-08 41