|
Name : RSal33209_0276 (RSal33209_0276) Accession : YP_001623446.1 Strain : Renibacterium salmoninarum ATCC 33209 Genome accession: NC_010168 Putative virulence/resistance : Unknown Product : MMPL family transporter Function : - COG functional category : R : General function prediction only COG ID : COG2409 EC number : - Position : 234671 - 236992 bp Length : 2322 bp Strand : + Note : partial, C-terminus DNA sequence : ATGCTGGACAAGTTGAAAACCGATTTTCCGTCTTCTGCTGGCGGTAGCGCTGGCATTGTTTTTGAATCAGATAACGGCTT CAACGACGCACAGAAAACCGCGATCAGCGACGCGCTAAAAAACTTGGCCACCAAGAGCTACGTACAAAGTGCAGTGAGCC CGTTCGAGACTCAAGCTAAGTTGGACGGCGCGACCGCCCAGATTGCCGAGGGTCAGAAAAAGCTCGACGACGGCGCGCCA CAATTGGCCGCGGGCAAGGCTCAGCTGGCCCAGTTGGAGGCAATTCCACAGAAGCCCGCAGCGCTTGAGACTCAATATCA AGCACTCAAGGCCCAAATTGATGCTGCTGAAGCCGATGCGGCAGCTGGCGAAGCTAAGATCGCTGCGGCAAAACTTCAGG CAGCATCTTCGCAGGGCCTGCGCTTTGTCTCTGAAAATGGCAAAGCAGCTGTTGCCCAGGTTCAGTTCAAAGTCTCGCTG TACAGCCTGGAACCCAGCGACCGGAAAGATGTGCAGAGCATTGTTAACGCGGCTAAGTCCACCGGCGTTCAAATTTACTT CAGCAAGGAAATTACTGAAGATGTGTCGGAACTGTTCGGCCCGGCGGAGATTATCGGCGTCGTGATCGCCTTTATTGTGC TGCTGGTGATGCTGGGTACGTTGATTGCCGCCGGCCTGCCGCTGATTATGGCGGTGATCGGCGTTGGTGTTGGCGGTACC TTTGCGCTGACCGGCGTGATCGAAATGAGTTCGATCTCGCCAATGCTTGCGCTGATGCTCGGCCTGGCGGTAGGCATCGA TTATTCGCTCTTCATCGTCAATCGGCACCGGCAACAAATCTTGGCTGGCATGGAAATGCGCGAATCCATCGCCCGAGCCA CTGGAACTAGCGGCAAAGCGGTACTTTTCGCTGGCCTAACCGTAGTGATTGCGCTTGCCGCGCTGACGATCTCCGGGCTG CCTTTCCTCGGGGTGCTCGGGTTGGCGGCAGCAGCAACAGTTGCCTTCGCGCTACTCATCGCTTTGACGCTGACGCCAGC AATTCTGTCCCTCCTGGGCCGGCGGATCGTCTCCCGGCGGGCTTGGCGCAAAAACGCCGCACATCCGGGGGAAGCCGATG CTAAGTCGGAGGCCAAATCACACAGTGCTAAAGGTTCTGGCTGGGGCGGATTCGTCACCCGGCACCCCATCGTTACCCTG GCGGCCAGTGTCTTGGCGCTTATTGTGGTGGCTTTACCCGCAGCAAGTCTCCGCTTGGCGTTACCCGACGGCGGCTCCGA ACCGGTAGATTCGAGCGCTTTCAAGTCGTACCAGGCAATTGAGAAAAACTTCGGTGCTGGTATGAATGGCCCGATTGTGG TGGTGGGCGAGTTGCCTTCCGGGCTGACCGACGCGCAGGTTCAGCAGGCGCAATATAACGTGGCGGACAAACTCCGTTCC GTGCAAAATGTCGCTGCGGCAGTGCCTGTTGCGCTCAGCAATGATAAGCGAACCGCGGTCTTCCAGGTAATTCCGAAGGA TGGCCCAGCTAGCGCCAGCACCGTCCAGGTGGTTCACGATCTGCGTGAAGCTGGTAAGGATATTAAGGCCAGCACTGGCG TGCAGGTTGGTCTAACCGGTCAAACGGCCGCCAACGTTGACGTTTCGGCAAAACTAGGTGGCGCGCTGCCGCTGTACTTG GCCGTCGTCGTCGGCCTTTCACTGATCCTGCTGTTATCGGTGTTTCGCTCGATTGTGGTGCCGTTGCTAGCAACTGGCGG CTTCCTACTCTCGCTGGCGGCAAGCTTCGGCGGCGTGGTGGCGGTTTACCAATGGGGCTGGTTGGGTTCAGTGTTCGATG TACCTCATCCAGCTGCGGTGCTGTCCTTCTTACCGATCATCGTGATCGGGGTACTCTTTGGCCTGGCCATGGACTATCAG GTCTTCATTACCTCTGGCATGCGTGAGGCCTTTGCACACGGTGAAAACGCTAAGCAAGCCGTTCGCACCGGCTTTGGCCA CGCAGCCAAGGTAGTAGTGGCCGCGGCAATCATTATGACCAGCGTCTTCGCCGGATTCATCTTCTCGCACCTGACCATGA TTCGACCGATGGGCTTTGCGCTCGCCTTCGGCGTGCTGATTGATGCTTTCGTGGTGCGGATGACGATTGTGCCGGCCGCG ATGCATTTGCTTGGCAAATCAGCTTGGTGGTTGCCGAAGTGGCTCAACAAGATTCTGCCCGACGTCGATGTAGAAGGCGC GAAAGTTACCGCCCTCCACGAGTCTGCCGAAACAGCCACGGCTGATCCGCGAGATGAGGACCTCGCCGACGCGAAGGTGT AG Protein sequence : MLDKLKTDFPSSAGGSAGIVFESDNGFNDAQKTAISDALKNLATKSYVQSAVSPFETQAKLDGATAQIAEGQKKLDDGAP QLAAGKAQLAQLEAIPQKPAALETQYQALKAQIDAAEADAAAGEAKIAAAKLQAASSQGLRFVSENGKAAVAQVQFKVSL YSLEPSDRKDVQSIVNAAKSTGVQIYFSKEITEDVSELFGPAEIIGVVIAFIVLLVMLGTLIAAGLPLIMAVIGVGVGGT FALTGVIEMSSISPMLALMLGLAVGIDYSLFIVNRHRQQILAGMEMRESIARATGTSGKAVLFAGLTVVIALAALTISGL PFLGVLGLAAAATVAFALLIALTLTPAILSLLGRRIVSRRAWRKNAAHPGEADAKSEAKSHSAKGSGWGGFVTRHPIVTL AASVLALIVVALPAASLRLALPDGGSEPVDSSAFKSYQAIEKNFGAGMNGPIVVVGELPSGLTDAQVQQAQYNVADKLRS VQNVAAAVPVALSNDKRTAVFQVIPKDGPASASTVQVVHDLREAGKDIKASTGVQVGLTGQTAANVDVSAKLGGALPLYL AVVVGLSLILLLSVFRSIVVPLLATGGFLLSLAASFGGVVAVYQWGWLGSVFDVPHPAAVLSFLPIIVIGVLFGLAMDYQ VFITSGMREAFAHGENAKQAVRTGFGHAAKVVVAAAIIMTSVFAGFIFSHLTMIRPMGFALAFGVLIDAFVVRMTIVPAA MHLLGKSAWWLPKWLNKILPDVDVEGAKVTALHESAETATADPRDEDLADAKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CMM_0093 | YP_001220832.1 | RND family transporter | Not tested | chp/tomA region | Protein | 9e-75 | 44 |
