|
Name : RSal33209_2447 (RSal33209_2447) Accession : YP_001625587.1 Strain : Renibacterium salmoninarum ATCC 33209 Genome accession: NC_010168 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 2183757 - 2185181 bp Length : 1425 bp Strand : + Note : - DNA sequence : ATGTTCAAGTCCGCGGACGAAGTCCTCGCGTTTATCAAAGACGAAGAGGTCAAATTCGTCGATATCCGCTTCACTGATCT ACCTGGCGTACAGCAACACTTTAACGTGCCAGCGCAGAGCGTGGATGCGGATTTCTTTGTCAATGGTCAACTTTTCGATG GCTCGTCCATCCGAGGCTTCCAAGGCATCGCCGAATCGGATATGCAGCTCATCCCCGATGTGACCACGGCTTTTGTTGAT CCTTACCGGATCGAAAAAACTCTCGCCTTGAACTTCTCCATCGTCAATCCGCGCACCGGCGAACCGTACCACCGCGATCC TCGTGGTGTTGCCGAGCGCGCAGAAGCTTACCTAGCATCAACTGGTATTGCAGACACCGCGTTCTTTGCACCGGAGGCTG AGTTTTACGTCTTCGATAACGTGCAATATGAATCGTCACCGCAAGGCTCGTTCTACAAAGTCGATTCGATCGAGGCACCG TGGAACACCGGCCGCAAGGAAGACGGCGGCAACTTGGGTAACAAGATTCCGTTCAAGGGTGGGTATTTCCCGGTAGCGCC GGTGGATCACCAGGCTGATTTGCGTGACGCAATGTGCATCGCACTTGGCGAAGCCGGACTTGAAGTTGAGCGCTCGCACC ACGAAGTTGGCGCGGCCGGCCAAGCCGAGATCAACTACAAGTTTTCTACGCTGGTGCATGCTGCCGATGATCTGCAGAAG TTCAAGTACATCATCAAGAACACGGCCTCGGAGTGGGGCAAGACGGTCACGTTCATGCCAAAGCCAATCTTCGGCGATAA CGGCTCCGGCATGCACTGCCACCAGTCGCTCTGGACCGGCGGGCAACCGCTGTTCTACGACGAAAAGGGTTATGCTGGCT TGTCCGACCTAGCCCGTTGGTACATCGGCGGCCTACTCAAGCACTCTTCCGCGGTGCTCGCCTTCACTAACCCTACGGTG AACTCTTACCGCCGTTTGGTCAAGGGCTTCGAAGCCCCGGTCAACATGGTTTACTCGCAGGGCAATCGTTCGGCCGGCAT CCGGATCCCGATTACTGGTTCCAACCCGAAGGCCAAGCGGATCGAATTCCGCGCACCGGATCCGTCGTCGAACCCGTACT TGGCTTTCGCTGCACAGTTGATGGCTGGCCTGGATGGCATCCGCAATCGGATCGAACCACCCGCGCCGATCGATAAAGAC CTTTACGAGTTGCCGCCAGAAGAAGCTAAAGACATTCCTAAGGCTCCCGGATCCCTCGAAGAGGCATTAGCGGCTCTGGA AGCTGATACCGAGTTCCTGCAGGCCGGTGGCGTGTTCACCCAGGATCTGGTTGACACTTGGATCGAATACAAGCGTGAAT ACGAAATCAAGCCGCTAGCACTCCGCCCGAACCCGTTCGAATTCGAGCTCTATTACGGCGTGTAA Protein sequence : MFKSADEVLAFIKDEEVKFVDIRFTDLPGVQQHFNVPAQSVDADFFVNGQLFDGSSIRGFQGIAESDMQLIPDVTTAFVD PYRIEKTLALNFSIVNPRTGEPYHRDPRGVAERAEAYLASTGIADTAFFAPEAEFYVFDNVQYESSPQGSFYKVDSIEAP WNTGRKEDGGNLGNKIPFKGGYFPVAPVDHQADLRDAMCIALGEAGLEVERSHHEVGAAGQAEINYKFSTLVHAADDLQK FKYIIKNTASEWGKTVTFMPKPIFGDNGSGMHCHQSLWTGGQPLFYDEKGYAGLSDLARWYIGGLLKHSSAVLAFTNPTV NSYRRLVKGFEAPVNMVYSQGNRSAGIRIPITGSNPKAKRIEFRAPDPSSNPYLAFAAQLMAGLDGIRNRIEPPAPIDKD LYELPPEEAKDIPKAPGSLEEALAALEADTEFLQAGGVFTQDLVDTWIEYKREYEIKPLALRPNPFEFELYYGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 3e-85 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RSal33209_2447 | YP_001625587.1 | glutamine synthetase | VFG1399 | Protein | 3e-146 | 64 |
