Gene Information

Name : rph (RSal33209_1473)
Accession : YP_001624623.1
Strain : Renibacterium salmoninarum ATCC 33209
Genome accession: NC_010168
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1262694 - 1263446 bp
Length : 753 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGTCTTCGACTTCTGTTACTTCCGACCTGCGCGCCGACGGCCGTACCGCTGATCAACTTCGCGATATTTCCATTACTCG
TGGCTGGTCTAGTCAAGCTGAGGGATCCGCGCTGATCGAATTCGGTAACACGCGAGTGCTGTGTACTTCTTCGCTCACCG
AGGGCGTTCCGCGCTGGTTGCGCGGCGAAGGGCGGGGCTGGGTCACCGCCGAATATGCGATGCTTCCCCGGGCCACTAAT
ACCCGTTCAGATCGCGAGTCCGTAAAGGGAAAAATCGGCGGACGCACGCACGAGATTTCGCGGTTGATCGGACGCTCGTT
GCGCTCAATCATCGATACTAAAGCTTTGGGCGAGAATACGATCGTTCTTGACTGCGACGTCCTCCAAGCCGACGGCGGCA
CCCGGACTGCCGCGATTACCGGCGCCTACGTAGCGCTCGCAGAGTCGATCCGTTTCGCGCGTGAAAACAAGCTCATTTCC
GCGACAGCTCAGCCGTTGACAGATACCGTGGCGGCGGTCTCAGCTGGGATCATTGATACTGTGCCGATGCTGGACTTGGC
CTATGTGGAAGATGTTCGAGCAGAAACCGATATGAACGTCGTGGTGACCGGAAGCGGCAAATTTGTTGAGGTACAAGGCA
CCGCGGAAGGGGCACCTTTCGACCGAAATCAGCTTGACGCATTACTGGACTTGGCTTTGCTCGGCACTGCGCAACTTGCT
CAGATTCAACGCGAAACTCTCGGTTTGCTCTGA

Protein sequence :
MSSTSVTSDLRADGRTADQLRDISITRGWSSQAEGSALIEFGNTRVLCTSSLTEGVPRWLRGEGRGWVTAEYAMLPRATN
TRSDRESVKGKIGGRTHEISRLIGRSLRSIIDTKALGENTIVLDCDVLQADGGTRTAAITGAYVALAESIRFARENKLIS
ATAQPLTDTVAAVSAGIIDTVPMLDLAYVEDVRAETDMNVVVTGSGKFVEVQGTAEGAPFDRNQLDALLDLALLGTAQLA
QIQRETLGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-62 61