Gene Information

Name : RSal33209_1053 (RSal33209_1053)
Accession : YP_001624205.1
Strain : Renibacterium salmoninarum ATCC 33209
Genome accession: NC_010168
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 892225 - 892983 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence : 
ATGACGACTTTGACTGAACGCGAATACACTCACCAAGGCACGGCGGTCTCCGCCCGCGGCCTGCGCAAACACTACGGCAA
AGGTGAGACTGCGGTCGTCGCCTTAAAAGATGTAGACATCGATTTTGACCGCTCTCGGTTCACTGCAATCATGGGCCCCT
CCGGTAGCGGCAAGTCCACGCTGATGCATTGCCTCGCAGGATTGGATTCGGTCGACGGCGGCAGCATTCACCTTGGCGGC
ACCGACATCACTCAACTTGACGATGGCCAGCTAACGGCCCTGCGTCAGGACCGAATCGGCTTCATTTTTCAGGCCTTTAA
TTTGGTGCCTACCCTGACCGCTGAGCAGAACATCACCCTGCCGGTCGCGCTGGCGAACGGAAGCGTAGACAAGGATTGGT
TCACCTTCATCACCTCAACGCTGGGCCTGACTGACCGGCTCAAGCACCGTCCGTATCAGCTATCTGGTGGTCAGCAGCAG
CGCGTCGCCGTCGCCCGAGCATTGCTGACCCGGCCCGAGGTGATTTTTGCTGATGAGCCCACCGGCAACCTGGACTCACG
CGTTGGCGCCGAGGTGCTCGGCATGTTGCGCCGTTCCTCACAGGAAATGGGCCAAAGCATCATCATGGTCACGCACGATC
CGATTGCGGCTTCCTACACCGACCGCGTTGTGCTGCTCAGCGATGGTGAATTGGCTGGCGAACTGAGCAATCCAACTCCC
GGAACCGTACTTGCCGCACTGGCAACTTTTGGGGCCTAA

Protein sequence : 
MTTLTEREYTHQGTAVSARGLRKHYGKGETAVVALKDVDIDFDRSRFTAIMGPSGSGKSTLMHCLAGLDSVDGGSIHLGG
TDITQLDDGQLTALRQDRIGFIFQAFNLVPTLTAEQNITLPVALANGSVDKDWFTFITSTLGLTDRLKHRPYQLSGGQQQ
RVAVARALLTRPEVIFADEPTGNLDSRVGAEVLGMLRRSSQEMGQSIIMVTHDPIAASYTDRVVLLSDGELAGELSNPTP
GTVLAALATFGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-41 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-41 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-41 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSal33209_1053 YP_001624205.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-43 46
RSal33209_1053 YP_001624205.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-48 45
RSal33209_1053 YP_001624205.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-37 43
RSal33209_1053 YP_001624205.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-40 41