Gene Information

Name : sce7227 (sce7227)
Accession : YP_001617876.1
Strain : Sorangium cellulosum So ce 56
Genome accession: NC_010162
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 10089815 - 10090615 bp
Length : 801 bp
Strand : +
Note : Hypothetical protein

DNA sequence :
GTGATGCTGCCCCAGAGCCAAGACGTCGCCGCGGCGCCCCGAGACGAACCGCTCATCGAGCTCTCGAGCGTCCGCAAGGA
CTACACGACCGAGGCCGTCATCGTGAGGGCGCTCCGGCACGTGGATCTGACCATCCAGCACGGCGATTTCGTCGCGATCG
TCGGGCAGAGCGGCTCGGGCAAGAGCACCCTGATGAACATCATCGGGTGCCTGGACCGGCCGACGCACGGCACGTACCGG
CTCGACGGCCTCGACGTCACCCGGCGCAGCAACGACGCGCGCGCGATCGTCAGGAACCGCCTTATCGGGTTCGTCTTCCA
GGGCTTCAACCTGCTGCCGCGCACGACGGCGCTCGAGAACGTCGAGCTGCCGCTGGTCTACCGGGGCGTCGGCGCGGCGG
AGCGGCGCAAGCGGGCGCTCGACGCGCTCGGCGCGGTGGGGCTGGCCGAGCGCCTGCACCACACGCCGAACCAGCTCTCG
GGCGGGCAGCAGCAGCGCGTCGCCATCGCGCGGGCGCTCGTCACCTCACCGCCGCTGCTCCTCGCCGACGAGCCCACGGG
CAACCTCGACACGCGCACGAGCTACGAGGTGCTCGGGCTGCTGCAGAGGCTCAACCGGGGCGGGATCACGATCGTCCTCG
TGACGCACGAGCCGGACATCGCCGCCTGCGCGAGCCGCGTGATCACGATGCGCGACGGCGAGATCCGCAGCGATCTCAGG
AACGATCGCCCCGTCGACGCGGCCGCGGCGCTCGCCGCGCTGCCGCTCTCCGCGGCGGAGCGCGACGAGCTCTCGCCATG
A

Protein sequence :
MMLPQSQDVAAAPRDEPLIELSSVRKDYTTEAVIVRALRHVDLTIQHGDFVAIVGQSGSGKSTLMNIIGCLDRPTHGTYR
LDGLDVTRRSNDARAIVRNRLIGFVFQGFNLLPRTTALENVELPLVYRGVGAAERRKRALDALGAVGLAERLHHTPNQLS
GGQQQRVAIARALVTSPPLLLADEPTGNLDTRTSYEVLGLLQRLNRGGITIVLVTHEPDIAACASRVITMRDGEIRSDLR
NDRPVDAAAALAALPLSAAERDELSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sce7227 YP_001617876.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-55 55
sce7227 YP_001617876.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-47 53
sce7227 YP_001617876.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-40 49
sce7227 YP_001617876.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-39 43
sce7227 YP_001617876.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-34 42