Gene Information

Name : sce6717 (sce6717)
Accession : YP_001617366.1
Strain : Sorangium cellulosum So ce 56
Genome accession: NC_010162
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 9351179 - 9351877 bp
Length : 699 bp
Strand : -
Note : Hypothetical protein

DNA sequence : 
ATGACCGAGGGGTATCGCGACGGGAAGCCGAAGCCCATTGTCGAGCTGCAGGGGGTCGGCAAGAGCTATTTCCGCGACAA
GGAGCCGATCGTGGTGCTCGACAACATCACGCTCGACATCCCGGAGGGGTCGTACGAGGCGCTGATGGGGCCCTCGGGCT
CGGGCAAATCGACGCTGCTGAACCTGATCGCCGGGCTCGATCGCCCGACGCGCGGCACGGCGCGCGTGGCGGGGCAGGAC
CTCACGCGGATGAGCGACGGCGAGCTGGCGCGCTTCCGCTCCAGGACGATGGGCTTCATCTTCCAGGCTTACAACCTGAT
GCCGGTGCTCACCGCGGTCGAGAACGTCGAGCTGCCGCTCCTGCTCACGAACCTGTCTTCGTCCGAGCGGCGGAAGCGCG
CGCAGACGGCCCTGCGCGTCGTCGGGCTCGAGGAGCGGATGGGCCACTATCCCCGGCAGCTCTCCGGCGGCCAGGAGCAG
CGGGTCGCGATCGCACGGGCGATCGTGAACGACCCGACGATCATCGTGGCGGACGAGCCGACCGGCGATCTCGATCGCAA
GAGCGCCGACGAGATCCTGGCGCTCCTGGAGAAGCTCAACAAGGAGTTCAAGAAGACCATCCTGATGGTCACGCACGATC
CGCAGGCCGCCGAGCGCGCGACGGTGACGCGCCGGCTCGACAAGGGGAACCTGTCATGA

Protein sequence : 
MTEGYRDGKPKPIVELQGVGKSYFRDKEPIVVLDNITLDIPEGSYEALMGPSGSGKSTLLNLIAGLDRPTRGTARVAGQD
LTRMSDGELARFRSRTMGFIFQAYNLMPVLTAVENVELPLLLTNLSSSERRKRAQTALRVVGLEERMGHYPRQLSGGQEQ
RVAIARAIVNDPTIIVADEPTGDLDRKSADEILALLEKLNKEFKKTILMVTHDPQAAERATVTRRLDKGNLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sce6717 YP_001617366.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-45 50
sce6717 YP_001617366.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-41 49
sce6717 YP_001617366.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-42 43
sce6717 YP_001617366.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-40 41