Gene Information

Name : tpx (sce5724)
Accession : YP_001616367.1
Strain : Sorangium cellulosum So ce 56
Genome accession: NC_010162
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 8051995 - 8052489 bp
Length : 495 bp
Strand : +
Note : High confidence in function and specificity

DNA sequence : 
ATGGCTGAGACCAAGTTCAAGGGAAGCCCCATCCACACCGCCGGCGAGCTGCCGTCCGTCGGCGCGACCGCCCCCGACTT
CACGCTCGTGAAGACCGATCTCTCCGAGCGCAAGCTCTCGTCGTACTCCGGCAAGAAGATCCTCAACATCTTCCCGAGCG
TCGACACCCCCGTCTGCGCGAGATCCGTGCGCACGTTCCACGAGCGCGCCGAGAAGCTCCCGGGCGTGACGGTGCTCAAC
ATCTCGGCGGACCTGCCGTTCGCGCACACCCGGTTCTGCGCGTCCGAGGGCATCTCGAACGCGGAAGGCCTGTCGACGTT
CCGGGGAGATTTCGGCCAGAAGTACGGCGTCACGCTCGTCGACGGGCCGCTCGCCGGCCTGCTCGCGCGCTCGGTCCTCG
TGCTCGACGAGCAGAACAAGGTGCTCCACGTCGAGCTCGTGCCGGAGATCGCGCAGGAGCCCGATTACGACGCGGCCCTC
GCCAAGGTGCAGTGA

Protein sequence : 
MAETKFKGSPIHTAGELPSVGATAPDFTLVKTDLSERKLSSYSGKKILNIFPSVDTPVCARSVRTFHERAEKLPGVTVLN
ISADLPFAHTRFCASEGISNAEGLSTFRGDFGQKYGVTLVDGPLAGLLARSVLVLDEQNKVLHVELVPEIAQEPDYDAAL
AKVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 9e-30 44
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 4e-30 44
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-29 44
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 7e-30 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_001616367.1 thiol peroxidase VFG0087 Protein 4e-30 44