Gene Information

Name : sce5007 (sce5007)
Accession : YP_001615650.1
Strain : Sorangium cellulosum So ce 56
Genome accession: NC_010162
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 7032373 - 7033767 bp
Length : 1395 bp
Strand : -
Note : Family membership

DNA sequence : 
GTGAAGATCGCGCCGCGGTACGAGCTCTTCATCGGCGGCGCGTGGCGCGCTCCGGCCTCGGGCCGCTACCTCGACAGCAT
CAGCCCGTCGACCGAGGAGAAGCTCTGCGAGTTCGCCGAGGCCTCCGAGCAGGACGTCGATCTCGCCGTGCAGGCGGCGC
GGGCGGCGTACGAGAAGCACTGGTCGCGCATGCGCCCGCTCGAGCGCGGCAAGTACATCTACCGCATCGCCCGGGCCCTC
CAGGAGAAGGCGCGCGAGCTCGCCGTCGTCGAGTCGCTCGACGGGGGCAAGCCCATCAAGGAGTCCCGCGACGTCGATCT
CCCGCTCGCGGCCGCGCACTTCTTCTACCACGCGGGCTGGGCGGACAAGCTCGAGCACGCCTTTCCCGGGCGCGACCCCC
GGCCGCTCGGCGTCGCGGGCCAGGTGATCCCGTGGAACTTCCCGCTGCTCATGGCGGCGTGGAAGCTCGCCCCCGCGCTC
GCGGCGGGCAACACGTGCGTCCTCAAGCCCGCCGAGACGACGCCGCTCACCGCGCTGCTCCTCGCGAAGATCATCGAGGA
GGCCGATCTCCCGCCCGGCGTCGTCAACGTGGTCACGGGCGCCGGCGCGACCGGCGCCGCGGTCGTCGGCCACCCGGGCG
TCGACAAGGTCGCGTTCACCGGGTCGACCGAGGTCGGCAAGCGCATCCAGCGCGCGCTCGCCGGCACCGGGAAGCGGCTC
ACCCTCGAGCTCGGCGGCAAGGCCGCGAACATCGTGTTCGAGGACGCGCCGCTCGATCAGGCCGTCGAGGGGATCGTCGG
CGGCATCTTCTTCAACCAGGGCCACGTCTGCTGCGCGGGCTCGCGCCTCCTGGTCGAGGAGAGCGTCCACGACGCGCTCC
TCTTCAAGCTGCGCGAGCGCATGGCGACCCTGCGCGTCGGCGATCCGCTCGACAAGAACACGGACGTGGGCGCCATCAAC
TCGCGGGCGCAGCTCGCGAAGATCGAGGAGCTCGTGGCGGCGGGGGAGCGCGAGGGGGCCGCGCGCTTCTCGGTGAGCTG
CGCGCTCCCGCGGCGGGGCTACTGGTTCGCGCCGACGCTCTTCACGGGCGTCGCGCAGTCGCACCGGATCGCGCGCGAGG
AGATCTTCGGCCCGGTGCTCTCGATCTTGACCTTCCGCACGCCAGAGGAGGCGATCGAGAAGGCGAACAACACGATGTAC
GGGCTGTCGGCGGGCGTCTGGACCGGCAAGGGCTCGAAGAGCTTCTGGGTCGCGCAGCGGCTCCGCGCCGGCGTCGTCTG
GGCGAACACCTTCAACAAGTTCGATCCCAGCGCGCCGTTCGGCGGCTACAAGGAGAGCGGCTTCGGCCGCGAGGGCGGGC
GCCAGGGGCTGCTCGCCTACCTCGAGGTGGACTGA

Protein sequence : 
MKIAPRYELFIGGAWRAPASGRYLDSISPSTEEKLCEFAEASEQDVDLAVQAARAAYEKHWSRMRPLERGKYIYRIARAL
QEKARELAVVESLDGGKPIKESRDVDLPLAAAHFFYHAGWADKLEHAFPGRDPRPLGVAGQVIPWNFPLLMAAWKLAPAL
AAGNTCVLKPAETTPLTALLLAKIIEEADLPPGVVNVVTGAGATGAAVVGHPGVDKVAFTGSTEVGKRIQRALAGTGKRL
TLELGGKAANIVFEDAPLDQAVEGIVGGIFFNQGHVCCAGSRLLVEESVHDALLFKLRERMATLRVGDPLDKNTDVGAIN
SRAQLAKIEELVAAGEREGAARFSVSCALPRRGYWFAPTLFTGVAQSHRIAREEIFGPVLSILTFRTPEEAIEKANNTMY
GLSAGVWTGKGSKSFWVAQRLRAGVVWANTFNKFDPSAPFGGYKESGFGREGGRQGLLAYLEVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA ACK75580.1 aldehyde dehydrogenase Not tested VPI Protein 3e-34 45
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 5e-35 45
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 5e-35 45
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 2e-35 45
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 7e-36 45
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 7e-36 45
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 7e-36 45
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 3e-34 45
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 2e-35 45
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-54 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-58 44
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-58 44
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-58 44
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-58 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sce5007 YP_001615650.1 aldehyde dehydrogenase VFG0082 Protein 1e-54 44