Gene Information

Name : sce4982 (sce4982)
Accession : YP_001615625.1
Strain : Sorangium cellulosum So ce 56
Genome accession: NC_010162
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 6998114 - 6998605 bp
Length : 492 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGAGGGATCGGTCGCGCCGAAAGAGCGCGTGAACATCACGTACAAGCCGGCCACCGGGAACGCGAAGGAGGACGT
CGAGCTGCCGCTGAAGCTCCTGATGCTCGGCGACTACACGCAGCGGCCGGATCCGCGGCCCCTCGAGGACCGCAAGCCCA
TCAACGTGGACAAGGACAACTTCCAGAAGGTCATGAGCGAGCAGAAGCTCGCGCTCACCTTCAACGTGAAGGACGTCCTG
TCCGAGCAGGAGAACAGCGAGCTCACGGTCAACCTCAAGTTCCGCCGGCTGAGCGACATGGAGCCCGAGGCGATCGCGAA
CCAGGTGCCGGAGCTCAAGAAGCTGCTCGACCTGCGCGCCGCGCTGACGGCCCTCAAGGGCCCGCTCGGAAACGAGAAGG
CGTTCCGCAACAAGATTCAGCAGATCCTGAGCGACCCGGCTCAGCGCAACAAGATCGTCAGCGAGCTCGGGCTCGACAAG
GAAGGGGAGTGA

Protein sequence :
MKEGSVAPKERVNITYKPATGNAKEDVELPLKLLMLGDYTQRPDPRPLEDRKPINVDKDNFQKVMSEQKLALTFNVKDVL
SEQENSELTVNLKFRRLSDMEPEAIANQVPELKKLLDLRAALTALKGPLGNEKAFRNKIQQILSDPAQRNKIVSELGLDK
EGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-31 47
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-31 44
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 8e-32 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sce4982 YP_001615625.1 hypothetical protein VFG2092 Protein 1e-42 55
sce4982 YP_001615625.1 hypothetical protein VFG2474 Protein 2e-39 51