Gene Information

Name : pyk (sce4540)
Accession : YP_001615183.1
Strain : Sorangium cellulosum So ce 56
Genome accession: NC_010162
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 6402662 - 6404089 bp
Length : 1428 bp
Strand : -
Note : High confidence in function and specificity

DNA sequence :
GTGCTCGTACGCAGAGCGAAAATCGTCTGTACCATTGGCCCTTCGTGTGACTCTCAAACGACGCTGGAGCAGCTCATCCG
CGCCGGTATGGATGTCGCTCGACTCAACTTCTCTCACGGCTCGCATGAGGATCATGGCAAAGCAATCGCCACGGTCCGTG
CGGCTGCGGAGGCATGCGGGAAGCCTGTCGCGATCCTGCAGGACCTCTGCGGCCCGAAGATCCGAGCCGGTCGCTTCCCC
GGCAACACCTTCGAGGTGGCTGACGGGGCTTCCGTCACCCTGATCGAGGCGAACAGGGACAGCCCAGTTGCCACGCCCGG
CGAGATCCCGATCCTCTACGAGGGGCTCGCGTCCGACCTGCAGCCGGGCGACGTCGTCCTGATCGACGACGGCCGCGTCG
TGGTCACCGTGACCAAGGTCGAAGGGGAGCGCGTCCACGCCGGCGTGACGCAGGGCGGACGCCTGCGCGATCGCGTCGGC
GTGCACCTGCCCGCGAGGCGCGTGCGCATCTCGGCCCTCACCGAGAAGGACAAGGCCGACCTGAGCTTCGGTCTCGCGCA
GGGGGTCGATTACGTCGCCCTCTCGTTCGTGCGCAACGCGGACGAGGTCCGGCACGTGCGCGACATCTGCGAGGCCTGGG
GTCGCCCGACGCCGATCGTCTCGAAGATCGAGACGCCAGGCGCCATCGACAACCTCGAGTCGATCATCCTCGCCTCGGAC
GGGGTCATGGTGGCGCGCGGCGACCTCGGCGTGGAGTTCAACCCGGAGCGGGTGCCGATCATCCAGCGCGAGATCCTCGG
CCTCGCGCGTGTGCACCAGAAGCCGGTCATCGTCGCGACCGAGATGCTCCAGTCGATGGTGACCGCGACGCGCCCGACGC
GCGCCGAGGCGAGCGACGTGGCGACGGCCGTCTTCGACGGCACCGACGCGGTCATGCTCTCGCAGGAGACCGCGACCGGC
GCGCACCCGCCGCTCGTCGTGCGGATGATGGCCCGCATCGTCACCGAGGCCGAGCAGAGCTCGTTCTATCGGTATCTCTC
GAGCGAGCAGCCCGGCCAGCGCGCCAACGTCCCGGAGGCGACAGCGCGCGCCGCGTGCGACATCGCGAAGGACATCGGCG
CGAAGCTCATCATCGCGTTCACCGAGAGCGGCCTCACCGCGCGGTACGCGTCGAAGGCGCGCCCCGTGGTGCCGATCGTC
GCCTTCTCGCCGAACGACACGACGCGCCGGCGGCTCGCGCTGCTCTGGGGCGTGGTGCCGTTCCCCGTCGACGCGCTCCG
GAACTCGGACGAGATGATCGAGCGCGCCACCGGGTACCTGCTTGCGAACGGCCTCGTCTCGCCGGGCGACAAGCTCGTCA
CCATCTTCGGCGCTCCTGTCGGCGTCTCGGGGTCGACCAACACGATTCGGGTGAAGGTCGTTGAATGA

Protein sequence :
MLVRRAKIVCTIGPSCDSQTTLEQLIRAGMDVARLNFSHGSHEDHGKAIATVRAAAEACGKPVAILQDLCGPKIRAGRFP
GNTFEVADGASVTLIEANRDSPVATPGEIPILYEGLASDLQPGDVVLIDDGRVVVTVTKVEGERVHAGVTQGGRLRDRVG
VHLPARRVRISALTEKDKADLSFGLAQGVDYVALSFVRNADEVRHVRDICEAWGRPTPIVSKIETPGAIDNLESIILASD
GVMVARGDLGVEFNPERVPIIQREILGLARVHQKPVIVATEMLQSMVTATRPTRAEASDVATAVFDGTDAVMLSQETATG
AHPPLVVRMMARIVTEAEQSSFYRYLSSEQPGQRANVPEATARAACDIAKDIGAKLIIAFTESGLTARYASKARPVVPIV
AFSPNDTTRRRLALLWGVVPFPVDALRNSDEMIERATGYLLANGLVSPGDKLVTIFGAPVGVSGSTNTIRVKVVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-67 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 8e-67 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-67 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_001615183.1 hypothetical protein VFG0479 Protein 7e-68 41